Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049170 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 8.3e-88 327.4 218 100.0
CSS0029174 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 4.1e-42 175.6 317 44.2
CSS0019797 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 9.0e-42 174.5 185 54.1
CSS0050355 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 5.5e-39 165.2 290 49.0
CSS0002401 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.8e-37 160.2 253 43.9
CSS0043086 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 2.3e-37 159.8 178 53.4
CSS0049384 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 2.3e-37 159.8 229 58.1
CSS0040834 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 2.6e-20 103.2 181 37.6
CSS0030658 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 4.4e-20 102.4 147 42.2
vmacro00126 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.4e-18 96.7 144 41.0
vmacro00125 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 9.1e-18 94.7 168 35.7
Rhsim05G0016700 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.2e-17 94.4 221 33.9
Rhsim11G0026900 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.7e-14 82.4 122 40.2
PGSC0003DMG400005052 Solanum tuberosum HOM05D000009 ORTHO05D000008 6.7e-13 78.6 304 28.0
CAN.G404.59 Capsicum annuum HOM05D000009 ORTHO05D000008 1.2e-12 77.8 190 33.7
PGSC0003DMG400008588 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.7e-12 74.7 142 35.2
Ciclev10027705m.g Citrus clementina HOM05D000009 ORTHO05D000008 6.3e-11 72.0 195 30.8
Peaxi162Scf00502g00212 Petunia axillaris HOM05D000009 ORTHO05D000008 4.1e-10 69.3 168 32.7
Medtr1g022380 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-09 67.8 191 32.5
vmacro23306 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.6e-09 67.4 221 29.0
Medtr5g071780 Medicago truncatula HOM05D000009 ORTHO05D000008 7.7e-09 65.1 173 32.4
arahy.Tifrunner.gnm1.ann1.JAA9B4 Arachis hypogaea HOM05D000009 ORTHO05D000008 1.7e-08 63.9 185 29.2
TAR636G0085 Trochodendron aralioides HOM05D000009 ORTHO05D000008 2.2e-08 63.5 184 31.0
Ca_05584_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.9e-08 63.2 152 30.3
Rhsim05G0016800 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.9e-08 63.2 154 31.8
PGSC0003DMG400019900 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.8e-08 62.8 136 33.1
Medtr5g071823 Medicago truncatula HOM05D000009 ORTHO05D000008 8.5e-08 61.6 130 31.5
Medtr5g071850 Medicago truncatula HOM05D000009 ORTHO05D000008 8.5e-08 61.6 130 31.5
TAR365G1199 Trochodendron aralioides HOM05D000009 ORTHO05D000008 8.5e-08 61.6 153 30.7
Aqoxy2G02945 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 1.5e-07 60.8 116 34.5
Aqoxy311s004 Aquilegia oxysepala HOM05D000009 ORTHO05D000008 1.5e-07 60.8 116 34.5
CAN.G1269.9 Capsicum annuum HOM05D000009 ORTHO05D000008 1.9e-07 60.5 149 32.9
Medtr5g070960 Medicago truncatula HOM05D000009 ORTHO05D000008 1.9e-07 60.5 174 30.5
TPR.G10597 Trifolium pratense HOM05D000009 ORTHO05D000008 1.9e-07 60.5 176 31.2
TPR.G24032 Trifolium pratense HOM05D000009 ORTHO05D000008 1.9e-07 60.5 152 30.3
Cc00_g33230 Coffea canephora HOM05D000009 ORTHO05D000008 2.5e-07 60.1 209 38.8
Lj2g0005356 Lotus japonicus HOM05D000009 ORTHO05D000008 2.5e-07 60.1 171 30.4
vmacro00268 Vaccinium macrocarpon HOM05D000009 ORTHO05D426527 2.5e-07 60.1 52 55.8
Cc00_g11540 Coffea canephora HOM05D000009 ORTHO05D000008 3.2e-07 59.7 57 54.4
Cc08_g05270 Coffea canephora HOM05D000009 ORTHO05D000008 3.2e-07 59.7 57 54.4
TPR.G29203 Trifolium pratense HOM05D000009 ORTHO05D000008 3.2e-07 59.7 185 29.2
Medtr5g037450 Medicago truncatula HOM05D000009 ORTHO05D000008 4.2e-07 59.3 168 31.0
Medtr7g071940 Medicago truncatula HOM05D000009 ORTHO05D000008 4.2e-07 59.3 174 28.2
PGSC0003DMG401030883 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.5e-07 58.9 141 31.2
TPR.G5098 Trifolium pratense HOM05D000009 ORTHO05D000008 5.5e-07 58.9 176 30.7
TAR628G1055 Trochodendron aralioides HOM05D000009 ORTHO05D000008 7.2e-07 58.5 173 31.2
arahy.Tifrunner.gnm1.ann1.936HGS Arachis hypogaea HOM05D000009 ORTHO05D000008 9.4e-07 58.2 185 29.2
PGSC0003DMG400029590 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.4e-07 58.2 134 34.3
TPR.G20861 Trifolium pratense HOM05D000009 ORTHO05D000008 9.4e-07 58.2 188 29.8
arahy.Tifrunner.gnm1.ann1.0R3YGY Arachis hypogaea HOM05D000009 ORTHO05D000008 1.2e-06 57.8 201 29.4
Ca_05627_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.2e-06 57.8 154 29.9
arahy.Tifrunner.gnm1.ann1.EM6AHT Arachis hypogaea HOM05D000009 ORTHO05D000008 1.6e-06 57.4 144 32.6
arahy.Tifrunner.gnm1.ann1.JK0RBR Arachis hypogaea HOM05D000009 ORTHO05D000008 1.6e-06 57.4 193 27.5
arahy.Tifrunner.gnm1.ann1.SY9UAE Arachis hypogaea HOM05D000009 ORTHO05D000008 2.7e-06 56.6 185 27.0
Cc08_g04160 Coffea canephora HOM05D000009 ORTHO05D000008 2.7e-06 56.6 179 28.5
Medtr5g071570 Medicago truncatula HOM05D000009 ORTHO05D000008 2.7e-06 56.6 174 27.0
CAN.G773.3 Capsicum annuum HOM05D000009 ORTHO05D000008 3.6e-06 56.2 141 32.6
CANSAT64G0522 Cannabis sativa HOM05D000009 ORTHO05D000008 4.7e-06 55.8 167 29.3
PGSC0003DMG400017065 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.7e-06 55.8 118 32.2
PGSC0003DMG400019806 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.7e-06 55.8 130 35.4
TPR.G24040 Trifolium pratense HOM05D000009 ORTHO05D000008 4.7e-06 55.8 173 29.5
arahy.Tifrunner.gnm1.ann1.I91QXC Arachis hypogaea HOM05D000009 ORTHO05D000008 6.1e-06 55.5 185 27.6
Cc00_g27700 Coffea canephora HOM05D000009 ORTHO05D000008 6.1e-06 55.5 57 52.6


User provided reference genes

Program Settings