Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 3.6e-54 215.3 171 100.0
CSS0009678 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 4.0e-29 132.1 154 51.9
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 4.6e-25 118.6 80 71.2
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 1.1e-21 107.5 173 40.5
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 2.0e-20 103.2 78 61.5
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 2.6e-20 102.8 79 65.8
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 4.6e-17 92.0 169 65.1
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 2.8e-14 82.8 46 87.0
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 6.2e-14 81.6 46 87.0
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 6.2e-14 81.6 46 87.0
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 2.4e-13 79.7 47 83.0
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 1.2e-12 77.4 46 82.6
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 5.8e-12 75.1 48 75.0
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 2.2e-11 73.2 46 73.9
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 1.9e-10 70.1 42 76.2
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 4.2e-10 68.9 37 91.9
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 5.5e-10 68.6 38 89.5
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 5.5e-10 68.6 38 89.5
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 1.2e-09 67.4 37 89.2
MD15G1234500 Malus domestica HOM05D007700 ORTHO05D009669 1.6e-09 67.0 38 78.9
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 2.1e-09 66.6 46 73.9
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 3.5e-09 65.9 39 79.5
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 6.1e-09 65.1 37 86.5
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 1.3e-08 63.9 44 63.6
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 1.3e-08 63.9 38 81.6
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 1.3e-08 63.9 36 86.1
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.8e-08 63.5 36 86.1
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.8e-08 63.5 36 86.1
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 1.8e-08 63.5 37 86.5
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 5.1e-08 62.0 35 82.9
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 5.1e-08 62.0 36 83.3
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 1.1e-07 60.8 36 83.3
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 1.1e-07 60.8 36 83.3
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 2.5e-07 59.7 34 85.3
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 3.3e-07 59.3 35 80.0
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 3.3e-07 59.3 35 80.0
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 4.3e-07 58.9 41 73.2
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 4.3e-07 58.9 35 77.1
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 4.3e-07 58.9 35 77.1
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 5.7e-07 58.5 35 82.9
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 7.4e-07 58.2 35 77.1
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 9.7e-07 57.8 35 80.0
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 1.3e-06 57.4 35 74.3
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 2.8e-06 56.2 34 76.5
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 2.8e-06 56.2 30 93.3
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 3.7e-06 55.8 34 73.5
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 3.7e-06 55.8 36 77.8
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 3.7e-06 55.8 32 84.4
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 3.7e-06 55.8 32 78.1


User provided reference genes

Program Settings