Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 2.1e-270 935.3 527 100.0
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 1.4e-104 384.4 307 71.7
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.4e-101 374.4 308 66.6
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.9e-101 374.0 311 67.8
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.9e-101 374.0 311 67.8
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 4.2e-101 372.9 283 70.3
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 5.5e-101 372.5 283 71.4
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.2e-100 371.3 281 71.5
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 4.6e-100 369.4 312 65.7
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 7.9e-100 368.6 284 70.4
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 7.9e-100 368.6 281 71.2
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 1.0e-99 368.2 255 78.4
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.0e-99 368.2 281 71.2
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 1.8e-99 367.5 281 71.2
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 1.8e-99 367.5 281 71.2
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 3.9e-99 366.3 281 70.1
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 5.1e-99 365.9 308 65.3
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 6.7e-99 365.5 281 71.9
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 6.7e-99 365.5 281 70.8
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.1e-98 364.8 283 71.0
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.5e-98 364.4 316 67.1
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 2.5e-98 363.6 282 69.5
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 9.6e-98 361.7 281 69.4
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 1.3e-97 361.3 310 64.8
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 3.7e-97 359.8 309 63.8
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 8.2e-97 358.6 310 64.2
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 2.4e-96 357.1 285 69.1
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 4.1e-96 356.3 310 63.9
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 4.1e-96 356.3 309 64.7
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 5.3e-96 355.9 281 69.4
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 5.3e-96 355.9 308 64.3
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 6.9e-96 355.5 281 69.4
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 1.2e-95 354.8 282 68.4
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.2e-95 354.8 281 68.0
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 1.2e-95 354.8 285 69.1
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 1.5e-95 354.4 281 68.0
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 1.5e-95 354.4 311 64.0
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 2.6e-95 353.6 285 67.4
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.6e-95 353.6 285 67.4
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 4.5e-95 352.8 284 68.0
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 5.8e-95 352.4 281 68.3
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 7.6e-95 352.1 289 64.4
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 7.6e-95 352.1 284 67.3
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.3e-94 351.3 281 67.3
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.0
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 2.2e-94 350.5 289 64.4
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 2.9e-94 350.1 281 67.6
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 2.9e-94 350.1 309 64.1
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 3.8e-94 349.7 311 63.0
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 5.0e-94 349.4 309 63.4
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 5.0e-94 349.4 282 65.2
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 8.4e-94 348.6 289 63.7
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 8.4e-94 348.6 281 68.3
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 8.4e-94 348.6 281 66.5
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 8.4e-94 348.6 289 64.0
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 8.4e-94 348.6 281 66.9
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 2.5e-93 347.1 309 63.1
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 1.2e-92 344.7 289 63.0
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 1.6e-92 344.4 280 66.1
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 6.1e-92 342.4 281 66.5
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 7.9e-92 342.0 281 66.2
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.0e-91 341.7 298 63.8
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 2.3e-91 340.5 281 65.1
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 7.4e-90 335.5 281 64.4
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 1.3e-89 334.7 294 63.6
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 2.2e-89 334.0 281 64.1
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 9.0e-88 328.6 257 70.4
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 9.0e-88 328.6 285 63.5
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 9.0e-88 328.6 285 63.5
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 4.5e-87 326.2 317 59.6
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 2.2e-86 323.9 296 61.1
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 2.9e-86 323.6 281 63.0
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 3.8e-86 323.2 280 62.5
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 5.0e-86 322.8 288 61.5
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 5.0e-86 322.8 283 61.5
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 4.2e-85 319.7 264 66.3
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 1.6e-84 317.8 286 60.5
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.1e-84 317.4 282 60.3
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 4.6e-84 316.2 284 61.3
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 3.9e-83 313.2 376 51.1
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 6.7e-83 312.4 293 59.4
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 1.1e-82 311.6 285 60.0
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 2.5e-82 310.5 255 65.1
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 3.3e-82 310.1 286 58.7
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 5.7e-82 309.3 334 55.4
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 2.8e-81 307.0 285 63.2
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.8e-80 304.3 282 62.1
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 2.6e-79 300.4 281 58.7
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 2.6e-79 300.4 284 57.0
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 3.4e-79 300.1 287 59.2
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 7.7e-79 298.9 283 59.4
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 2.9e-78 297.0 227 74.0
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 1.1e-74 285.0 201 79.6
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 2.2e-73 280.8 277 59.2
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 1.1e-72 278.5 257 60.3
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 2.6e-71 273.9 313 54.6
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 8.5e-70 268.9 285 58.2
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 2.5e-69 267.3 292 53.8
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 7.5e-66 255.8 229 62.9
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 9.7e-66 255.4 287 52.3
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 3.1e-64 250.4 228 58.8
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 4.1e-64 250.0 283 49.5
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 6.1e-60 236.1 292 46.2
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 3.4e-58 230.3 199 66.8
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 4.5e-55 219.9 231 57.1
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.5e-53 214.9 321 42.1
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 3.2e-53 213.8 265 49.8
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 2.7e-52 210.7 207 57.0
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 1.0e-51 208.8 192 63.5
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 1.0e-51 208.8 268 45.9
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.0e-51 208.8 282 46.1
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.4e-48 198.4 339 38.1
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.7e-47 192.6 282 42.6
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 3.8e-46 190.3 166 65.7
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.8e-46 190.3 318 39.0
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 4.3e-45 186.8 126 73.8
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.2e-44 185.3 172 60.5
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 4.7e-44 183.3 251 47.4
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 2.3e-43 181.0 294 37.1
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 1.3e-41 175.3 145 64.8
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 2.2e-33 147.9 284 35.9
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 1.6e-31 141.7 149 58.4
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 1.0e-30 139.0 299 33.1
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.3e-30 137.9 281 35.2
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 6.6e-30 136.3 103 66.0
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.3e-29 133.7 312 34.0
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-18 97.1 72 62.5
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 1.7e-17 95.1 49 91.8
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 4.6e-15 87.0 48 85.4
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 8.6e-14 82.8 53 71.7
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.9e-13 81.6 84 50.0
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 9.6e-13 79.3 82 58.5
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 1.1e-11 75.9 53 66.0
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 3.1e-11 74.3 50 70.0
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 5.2e-11 73.6 53 64.2
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 5.2e-11 73.6 92 46.7
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 1.2e-10 72.4 48 79.2
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 5.8e-10 70.1 178 32.6
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 2.9e-09 67.8 54 59.3
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 5.4e-08 63.5 49 67.3
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 4.6e-07 60.5 39 64.1
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.6e-07 60.5 121 33.1
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 2.3e-06 58.2 27 81.5
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-06 57.4 39 59.0
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 5.1e-06 57.0 39 74.4


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