Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048981 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.4e-154 547.4 274 100.0
CSS0022512 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.6e-67 260.4 221 63.8
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.6e-67 258.8 236 59.7
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.2e-64 248.4 248 56.5
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 1.3e-61 240.7 269 54.3
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 7.1e-60 235.0 243 53.1
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-59 232.6 225 57.3
CSS0036689 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.0e-58 231.1 206 60.2
CSS0019089 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.6e-58 228.0 215 58.1
CSS0009117 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 5.6e-57 225.3 207 57.5
CSS0036809 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 7.6e-54 214.9 198 62.1
CSS0043832 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 9.9e-54 214.5 191 62.8
CSS0008160 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.8e-53 212.6 183 64.5
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 3.8e-53 212.6 187 64.2
CSS0016236 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.1e-51 206.8 187 64.2
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.0e-46 190.3 187 60.4
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.0e-46 190.3 187 60.4
CSS0041871 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-45 185.7 191 57.6
CSS0038897 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-39 166.8 190 53.7
CSS0032039 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 5.3e-39 165.6 199 50.3
CSS0039815 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.0e-39 164.9 189 55.0
CSS0026511 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-38 164.5 190 53.2
CSS0007861 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-38 164.1 190 54.7
CSS0002710 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-38 161.8 107 76.6
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 1.7e-37 160.6 184 53.3
CSS0030144 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.1e-35 153.7 195 48.2
CSS0010281 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 3.0e-34 149.8 200 48.5
CSS0029947 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.1e-33 147.9 194 48.5
CSS0006192 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-30 135.2 99 71.7
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.6e-27 127.5 162 45.1
CSS0044774 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-24 117.5 87 69.0
CSS0042809 Camellia sinensis var. sinensis HOM05D019011 ORTHO05D113571 7.2e-20 102.1 68 76.5
CSS0004472 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 5.1e-18 95.9 96 55.2
CSS0011565 Camellia sinensis var. sinensis HOM05D019011 ORTHO05D112942 1.9e-17 94.0 68 70.6
CSS0020793 Camellia sinensis var. sinensis HOM05D019011 ORTHO05D112577 9.7e-17 91.7 68 70.6
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 1.7e-16 90.9 161 37.3
CSS0045933 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.2e-14 84.7 67 64.2
CSS0027531 Camellia sinensis var. sinensis HOM05D005401 ORTHO05D006582 1.5e-14 84.3 72 61.1
CSS0027775 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.1e-12 78.2 51 72.5
CSS0003705 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.5e-12 77.0 61 62.3
CSS0039633 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.2e-12 76.3 180 35.6
CSS0022707 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.5e-12 75.9 51 72.5
CSS0005008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.4e-10 71.2 51 68.6
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.4e-10 71.2 158 30.4
CSS0022738 Camellia sinensis var. sinensis HOM05D019011 ORTHO05D110979 3.9e-10 69.7 81 50.6
CSS0012242 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.4e-09 65.5 51 56.9
CSS0028719 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-07 60.5 58 60.3
Rhsim02G0143100 Rhododendron simsii HOM05D000815 ORTHO05D000636 2.4e-07 60.5 85 35.3
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 9.1e-07 58.5 74 36.5
vmacro05300 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 9.1e-07 58.5 70 35.7
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 9.1e-07 58.5 187 25.1
vmacro17734 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 9.1e-07 58.5 70 35.7
vmacro23438 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 9.1e-07 58.5 70 35.7
vmacro09783 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.2e-06 58.2 72 36.1
vmacro12702 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.2e-06 58.2 72 36.1
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 1.5e-06 57.8 63 41.3
vmacro05316 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.6e-06 57.0 59 39.0
vmacro07201 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.6e-06 57.0 59 39.0
vmacro14332 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.6e-06 57.0 59 39.0
CSS0004627 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.9e-06 55.8 81 44.4


User provided reference genes

Program Settings