Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 2.4e-195 685.3 334 100.0
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 5.6e-160 567.8 338 80.5
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 7.6e-157 557.4 339 79.9
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.4e-155 552.4 344 79.7
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 5.1e-153 544.7 345 76.8
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 2.1e-151 539.3 341 76.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 1.4e-150 536.6 341 76.2
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 2.4e-150 535.8 343 76.1
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 8.4e-148 527.3 290 82.4
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.9e-147 526.2 333 76.9
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 7.1e-147 524.2 344 73.3
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.6e-146 523.1 311 80.1
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 1.0e-145 520.4 292 82.5
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 3.9e-145 518.5 335 76.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 6.7e-145 517.7 340 74.4
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.5e-144 516.5 314 78.3
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.5e-144 515.8 314 78.3
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 5.6e-144 514.6 340 74.1
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.6e-143 513.1 364 70.9
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.1e-143 512.7 316 76.9
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 8.1e-143 510.8 342 71.3
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 8.1e-143 510.8 311 77.8
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.5e-141 506.5 289 80.3
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.0e-141 506.1 298 78.2
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.0e-141 506.1 285 80.4
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 1.0e-140 503.8 286 80.1
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.3e-140 503.4 308 74.4
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.3e-140 503.4 339 72.3
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 1.7e-140 503.1 337 72.4
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 2.2e-140 502.7 333 71.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 3.8e-140 501.9 340 73.2
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 4.9e-140 501.5 285 79.6
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.9e-140 501.5 306 76.8
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 6.5e-140 501.1 293 76.1
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 8.4e-140 500.7 348 69.0
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.1e-139 500.4 320 72.8
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 1.1e-139 500.4 306 76.5
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 7.1e-139 497.7 341 71.6
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.2e-138 496.9 285 80.0
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.1e-138 496.1 340 69.7
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.7e-138 495.7 322 73.6
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 3.5e-138 495.4 338 70.4
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 3.5e-138 495.4 340 71.2
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 7.9e-138 494.2 286 78.7
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.0e-137 493.8 340 70.9
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 1.3e-137 493.4 293 75.8
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 8.7e-137 490.7 333 68.5
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 8.7e-137 490.7 340 70.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 7.4e-136 487.6 334 71.3
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 2.1e-135 486.1 288 78.5
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 2.8e-135 485.7 330 70.9
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 3.7e-135 485.3 299 75.6
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.4e-134 483.4 315 70.8
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 9.0e-134 480.7 334 70.4
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 3.4e-133 478.8 286 74.8
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.0e-132 477.2 334 69.2
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.3e-132 476.9 334 67.7
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.7e-132 476.5 291 75.3
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.5e-131 472.6 271 79.7
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 3.2e-131 472.2 329 68.7
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 7.2e-131 471.1 307 73.0
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 7.2e-131 471.1 307 73.0
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.6e-130 469.9 313 70.3
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 3.9e-129 465.3 296 72.6
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 5.1e-129 464.9 311 68.5
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 6.7e-129 464.5 293 72.4
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 8.7e-129 464.2 342 65.5
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 1.9e-128 463.0 311 68.5
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 1.9e-128 463.0 339 66.7
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.6e-127 459.9 306 68.3
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.6e-127 459.9 327 67.3
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 2.2e-127 459.5 312 68.3
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 2.8e-127 459.1 307 69.4
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 6.3e-127 458.0 312 67.9
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 1.4e-126 456.8 290 72.4
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.4e-126 456.8 292 76.7
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 1.8e-126 456.4 296 70.6
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 2.4e-126 456.1 320 67.2
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 2.0e-125 453.0 285 68.4
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 7.7e-125 451.1 283 72.4
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.9e-123 446.4 321 68.5
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 5.5e-123 444.9 291 69.8
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.1e-120 437.2 313 63.9
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 2.2e-119 433.0 248 80.6
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 5.0e-116 421.8 245 79.2
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 1.1e-115 420.6 287 67.9
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.9e-115 419.9 248 77.8
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 2.5e-115 419.5 244 79.5
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.6e-112 409.5 289 64.0
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 5.3e-110 401.7 246 73.6
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 7.0e-110 401.4 285 64.2
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 2.1e-106 389.8 295 62.7
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.4e-105 387.1 308 60.4
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 2.8e-103 379.4 288 58.3
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 1.7e-95 353.6 252 69.0
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 7.0e-94 348.2 282 56.4
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.2e-85 320.9 197 73.6
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 1.4e-73 280.8 306 47.1
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 4.0e-73 279.3 197 70.6
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 5.6e-59 232.3 144 75.7
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.6e-53 214.2 156 72.4
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.3e-51 206.5 109 82.6
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 3.6e-50 203.0 114 75.4
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.2e-45 188.0 105 82.9
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.1e-41 174.9 286 36.7
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 3.2e-38 163.3 156 55.1
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.6e-37 161.0 111 68.5
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 6.0e-37 159.1 153 58.8
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.8e-28 131.0 92 67.4
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 6.5e-23 112.5 135 48.9
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 2.2e-15 87.4 55 70.9
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 4.2e-14 83.2 97 50.5
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.3e-10 71.6 43 72.1
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.6e-10 71.2 49 65.3
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 8.2e-10 68.9 42 73.8


User provided reference genes

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