Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.5e-67 257.7 147 100.0
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.6e-66 256.1 147 97.3
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.7e-28 129.8 148 63.5
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.7e-28 129.8 148 63.5
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 8.3e-15 84.3 171 44.4
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 9.2e-14 80.9 167 43.7
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 8.6e-12 74.3 155 41.3
Hma1.2p1_0744F.1_g211700 Hydrangea macrophylla HOM05D008563 ORTHO05D009802 7.3e-11 71.2 149 47.0
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 2.1e-10 69.7 79 55.7
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 2.8e-10 69.3 79 54.4
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 2.8e-10 69.3 148 37.8
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 4.7e-10 68.6 155 45.8
Gorai.003G104300 Gossypium raimondii HOM05D008563 ORTHO05D009802 8.0e-10 67.8 156 44.2
Dinv36837 Davidia involucrata HOM05D008563 ORTHO05D009802 1.0e-09 67.4 152 48.0
Nitab4.5_0000646g0100 Nicotiana tabacum HOM05D014920 ORTHO05D009802 1.0e-09 67.4 151 40.4
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 5.2e-09 65.1 170 47.1
PSO017G1525 Papaver somniferum HOM05D042328 ORTHO05D009956 5.2e-09 65.1 154 40.9
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 2.6e-08 62.8 156 39.7
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 2.6e-08 62.8 78 50.0
Nitab4.5_0004190g0010 Nicotiana tabacum HOM05D014920 ORTHO05D009802 2.6e-08 62.8 167 44.9
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 3.4e-08 62.4 157 42.7
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 3.4e-08 62.4 132 37.9
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 3.4e-08 62.4 162 38.3
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 5.8e-08 61.6 77 49.4
PSO478G2273 Papaver somniferum HOM05D042328 ORTHO05D009956 1.3e-07 60.5 154 39.6
Glyma.04G157900 Glycine max HOM05D008563 ORTHO05D009956 1.7e-07 60.1 94 48.9
QL10p021529 Quercus lobata HOM05D008563 ORTHO05D009802 1.7e-07 60.1 157 42.7
Aqoxy3G03789 Aquilegia oxysepala HOM05D018804 ORTHO05D009802 2.2e-07 59.7 149 37.6
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 4.9e-07 58.5 163 38.7
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 6.4e-07 58.2 143 40.6
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 8.3e-07 57.8 120 40.0
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 8.3e-07 57.8 139 38.8
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 8.3e-07 57.8 77 49.4
Nn3g17602 Nelumbo nucifera HOM05D008563 ORTHO05D009802 1.1e-06 57.4 158 46.2
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 1.4e-06 57.0 137 43.1
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 1.4e-06 57.0 161 35.4
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 1.4e-06 57.0 126 37.3
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 1.9e-06 56.6 120 43.3
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 2.4e-06 56.2 151 35.1
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 2.4e-06 56.2 124 37.1
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 3.2e-06 55.8 125 40.0
Nitab4.5_0002805g0110 Nicotiana tabacum HOM05D014920 ORTHO05D009802 3.2e-06 55.8 159 38.4
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 4.1e-06 55.5 132 39.4
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 4.1e-06 55.5 113 39.8
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 7.0e-06 54.7 140 40.7
Rhsim09G0117600 Rhododendron simsii HOM05D011353 ORTHO05D009802 7.0e-06 54.7 120 49.2
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 9.2e-06 54.3 85 44.7


User provided reference genes

Program Settings