Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 2.0e-178 629.0 320 100.0
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.8e-171 605.9 320 97.2
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 3.8e-137 491.9 318 80.2
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 4.3e-125 451.8 321 74.1
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 7.6e-122 441.0 318 68.6
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 5.4e-120 434.9 318 71.1
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 7.9e-119 431.0 318 67.3
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 1.0e-118 430.6 299 75.9
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 1.0e-118 430.6 317 70.7
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 1.8e-118 429.9 318 67.0
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 1.8e-118 429.9 323 70.6
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 3.6e-116 422.2 320 69.1
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 4.8e-116 421.8 320 69.4
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 1.1e-115 420.6 320 69.7
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 3.1e-115 419.1 318 68.2
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 5.8e-114 414.8 318 68.9
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 5.8e-114 414.8 321 68.2
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 5.8e-114 414.8 326 66.6
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 9.9e-114 414.1 323 65.9
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 2.9e-113 412.5 321 68.5
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 4.9e-113 411.8 333 64.3
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 6.4e-113 411.4 320 67.2
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 8.4e-113 411.0 320 69.1
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 4.2e-112 408.7 320 68.8
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 5.5e-112 408.3 320 67.8
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 5.5e-112 408.3 315 67.9
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 9.3e-112 407.5 320 68.4
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 9.3e-112 407.5 320 68.8
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 9.3e-112 407.5 321 67.6
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 1.2e-111 407.1 318 68.2
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 1.6e-111 406.8 321 66.7
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 2.1e-111 406.4 321 70.1
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 2.7e-111 406.0 320 68.1
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 2.7e-111 406.0 330 63.6
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 4.6e-111 405.2 311 68.8
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 4.6e-111 405.2 359 62.1
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 7.9e-111 404.4 320 67.8
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 1.3e-110 403.7 320 65.9
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 1.3e-110 403.7 319 66.5
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 1.9e-109 399.8 316 66.1
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 1.9e-109 399.8 322 65.8
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 4.3e-109 398.7 320 66.9
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 5.6e-109 398.3 320 64.4
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 1.6e-108 396.7 335 64.5
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 1.1e-107 394.0 314 65.0
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 1.4e-107 393.7 317 65.6
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 1.4e-107 393.7 319 66.8
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 4.0e-107 392.1 323 66.3
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 5.3e-107 391.7 327 63.6
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.5e-106 390.2 325 64.6
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 2.0e-106 389.8 307 67.4
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 2.0e-106 389.8 320 64.7
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 2.0e-106 389.8 317 64.4
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 4.5e-106 388.7 320 65.6
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 2.2e-105 386.3 318 65.7
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 3.8e-105 385.6 314 64.6
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 6.5e-105 384.8 312 65.4
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 1.1e-104 384.0 314 63.7
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 1.4e-104 383.6 314 63.7
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 5.5e-104 381.7 317 64.0
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 5.5e-104 381.7 317 64.0
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 7.1e-104 381.3 317 63.4
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 1.2e-103 380.6 373 58.4
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 1.2e-103 380.6 344 61.6
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 3.5e-103 379.0 319 63.9
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 3.5e-103 379.0 314 62.4
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 1.0e-102 377.5 317 62.5
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 3.0e-102 375.9 321 62.3
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 5.1e-102 375.2 322 62.1
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 8.7e-102 374.4 317 62.1
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 1.3e-100 370.5 367 56.4
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.1e-99 367.5 321 60.7
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 1.2e-98 364.0 251 73.3
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 1.5e-98 363.6 377 55.2
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 2.6e-98 362.8 325 60.9
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 2.2e-97 359.8 317 60.3
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.1e-96 357.5 342 57.6
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 1.4e-96 357.1 325 60.0
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 7.2e-96 354.8 318 59.4
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 7.2e-96 354.8 317 58.7
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 1.2e-95 354.0 315 58.7
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 1.2e-95 354.0 318 59.1
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 1.6e-95 353.6 298 63.4
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 2.1e-95 353.2 319 58.9
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 3.6e-95 352.4 311 59.5
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.0e-94 350.9 312 61.5
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 2.3e-94 349.7 318 59.4
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 6.7e-94 348.2 318 59.7
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 1.5e-93 347.1 318 59.4
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 1.3e-92 344.0 317 58.0
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 1.6e-92 343.6 317 57.7
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 2.2e-92 343.2 317 58.0
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 2.8e-92 342.8 317 57.4
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 2.8e-92 342.8 317 57.4
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 2.8e-92 342.8 317 57.4
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 2.4e-91 339.7 327 56.9
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 2.4e-91 339.7 327 56.9
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 6.9e-91 338.2 317 56.2
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 1.2e-90 337.4 320 56.6
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 4.5e-90 335.5 314 56.4
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 2.2e-89 333.2 319 55.8
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 2.9e-89 332.8 306 59.2
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 1.8e-86 323.6 266 63.9
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 3.7e-84 315.8 311 55.6
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 4.5e-82 308.9 312 55.8
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 2.9e-81 306.2 264 62.9
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 5.5e-80 302.0 312 55.4
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 1.2e-79 300.8 301 57.1
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 1.2e-79 300.8 206 75.7
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 7.0e-75 285.0 353 50.7
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 2.6e-74 283.1 302 53.6
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 3.2e-72 276.2 325 52.0
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 3.7e-68 262.7 320 50.6
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 5.2e-62 242.3 273 50.5
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 1.7e-60 237.3 309 43.4
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 4.8e-60 235.7 313 44.4
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 5.0e-57 225.7 176 69.3
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 1.5e-56 224.2 320 42.5
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 2.9e-44 183.3 202 47.0
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 3.2e-43 179.9 110 83.6
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.6e-39 167.5 264 42.0
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 2.3e-38 163.7 177 45.8
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.5e-37 161.0 105 75.2
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 1.6e-34 151.0 110 70.9
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 7.8e-34 148.7 196 46.4
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 7.3e-32 142.1 154 55.2
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 4.6e-26 122.9 100 64.0
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 4.7e-23 112.8 224 37.1
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 8.9e-22 108.6 109 52.3
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 5.1e-17 92.8 99 55.6
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 6.6e-17 92.4 98 54.1
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 1.9e-16 90.9 337 29.7
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 4.4e-13 79.7 46 89.1
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 4.4e-13 79.7 46 89.1
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 4.4e-13 79.7 46 89.1
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 9.9e-13 78.6 83 54.2
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 3.8e-12 76.6 67 61.2
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 4.9e-12 76.3 49 81.6
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 6.4e-12 75.9 45 86.7
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 1.9e-11 74.3 54 66.7
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 5.4e-11 72.8 121 38.8
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 1.3e-09 68.2 53 56.6
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 5.6e-08 62.8 50 52.0
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 8.1e-07 58.9 122 35.2
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 1.1e-06 58.5 51 66.7
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 2.4e-06 57.4 36 69.4


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