Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 4.6e-85 317.8 153 100.0
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 1.0e-76 290.0 150 95.3
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 4.1e-73 278.1 144 94.4
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 5.3e-73 277.7 145 94.5
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 3.8e-71 271.6 130 99.2
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 1.4e-70 269.6 128 99.2
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 1.4e-70 269.6 128 99.2
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 1.4e-70 269.6 130 99.2
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 2.5e-70 268.9 129 98.4
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 7.2e-70 267.3 130 98.5
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 1.6e-69 266.2 131 97.7
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 2.1e-69 265.8 131 96.9
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 1.4e-68 263.1 126 98.4
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 1.4e-68 263.1 126 98.4
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 7.4e-67 257.3 141 90.1
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 2.0e-64 249.2 129 93.0
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 1.0e-60 236.9 109 100.0
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 1.4e-60 236.5 126 89.7
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.0e-55 220.3 127 84.3
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 3.4e-51 205.3 110 90.0
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 7.5e-51 204.1 100 95.0
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 2.2e-47 192.6 99 96.0
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 1.4e-44 183.3 107 84.1
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 6.3e-42 174.5 150 64.7
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 1.6e-40 169.9 84 92.9
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 3.8e-39 165.2 162 54.3
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 1.5e-38 163.3 82 90.2
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 8.3e-34 147.5 89 82.0
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 1.2e-32 143.7 67 98.5
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 3.5e-32 142.1 100 72.0
Peaxi162Scf00000g58015 Petunia axillaris HOM05D008490 ORTHO05D010725 9.5e-30 134.0 73 91.8
arahy.Tifrunner.gnm1.ann1.38FWT1 Arachis hypogaea HOM05D008490 ORTHO05D010725 2.2e-26 122.9 59 98.3
Hma1.2p1_0621F.1_g190810 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 2.9e-26 122.5 58 100.0
MBI05_g40994_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 3.9e-23 112.1 52 100.0
Hma1.2p1_0435F.1_g152380 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 5.6e-22 108.2 51 98.0
Peaxi162Scf00677g00334 Petunia axillaris HOM05D008490 ORTHO05D010725 1.6e-21 106.7 65 84.6
Nitab4.5_0005831g0100 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.1e-20 104.0 51 88.2
Nn2g14502 Nelumbo nucifera HOM05D008490 ORTHO05D010725 8.3e-18 94.4 40 100.0
Phvul.002G106400 Phaseolus vulgaris HOM05D008490 ORTHO05D010725 1.1e-17 94.0 46 87.0
Nitab4.5_0000127g0060 Nicotiana tabacum HOM05D008490 ORTHO05D010725 4.3e-14 82.0 52 75.0
CBR_g3174 Chara braunii HOM05D008490 ORTHO05D010725 6.2e-13 78.2 51 78.4
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 4.0e-12 75.5 98 43.9
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 7.6e-11 71.2 97 46.4
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 7.6e-11 71.2 94 43.6
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 6.4e-10 68.2 88 42.0
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.1e-09 67.4 93 41.9
Medtr3g463160 Medicago truncatula HOM05D021415 ORTHO05D010725 7.8e-08 61.2 31 87.1
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 3.0e-07 59.3 89 46.1
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 6.6e-07 58.2 86 45.3


User provided reference genes

Program Settings