Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048922 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.5e-187 657.5 338 100.0
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.9e-55 219.9 200 59.5
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 4.2e-54 216.1 221 55.2
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.9e-52 209.5 249 51.0
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.6e-48 196.8 204 55.9
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.9e-46 190.7 177 60.5
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.0e-44 184.9 201 54.2
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.7e-43 179.1 262 45.4
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 9.7e-43 178.3 204 52.5
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-42 177.6 191 55.0
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.3e-42 175.6 250 44.8
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.1e-41 172.9 194 52.1
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.8e-36 157.5 263 38.4
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.6e-35 153.7 126 63.5
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.3e-33 146.0 206 46.6
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.2e-30 135.6 101 68.3
CSS0018738 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.2e-22 109.8 60 83.3
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.0e-20 105.1 118 52.5
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 6.8e-20 102.4 173 37.6
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 7.7e-16 89.0 175 36.6
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.1e-13 80.9 90 53.3
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 5.7e-11 72.8 140 29.3
Hma1.2p1_0301F.1_g118220 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 2.2e-10 70.9 159 32.1
Hund10328 Selenicereus undatus HOM05D000034 ORTHO05D010947 3.7e-10 70.1 121 35.5
Cpa.g.sc68.23 Carica papaya HOM05D026412 ORTHO05D010611 4.9e-10 69.7 106 34.9
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.1e-09 68.6 144 31.9
Medtr5g025995 Medicago truncatula HOM05D005504 ORTHO05D002688 4.1e-09 66.6 142 29.6
Hund19303 Selenicereus undatus HOM05D000665 ORTHO05D000140 4.1e-09 66.6 60 55.0
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 2.0e-08 64.3 178 24.7
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 2.0e-08 64.3 142 31.0
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 2.0e-08 64.3 142 31.0
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 2.7e-08 63.9 191 26.7
Hund00253 Selenicereus undatus HOM05D012237 ORTHO05D010947 2.7e-08 63.9 60 53.3
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 3.5e-08 63.5 173 26.0
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 5.9e-08 62.8 156 26.3
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 5.9e-08 62.8 114 35.1
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 7.8e-08 62.4 140 27.9
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.8e-08 62.4 165 27.9
Hma1.2p1_0949F.1_g240650 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.0e-07 62.0 66 50.0
arahy.Tifrunner.gnm1.ann1.79E4ZF Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-07 61.2 157 28.0
Phvul.008G165300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.3e-07 60.8 107 29.9
Hma1.2p1_0340F.1_g129910 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 3.8e-07 60.1 52 55.8
arahy.Tifrunner.gnm1.ann1.R7WLJ8 Arachis hypogaea HOM05D000034 ORTHO05D002688 6.6e-07 59.3 153 25.5
Hund03621 Selenicereus undatus HOM05D000034 ORTHO05D010947 6.6e-07 59.3 130 28.5
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 8.6e-07 58.9 141 25.5
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 8.6e-07 58.9 99 31.3
Lsat_1_v5_gn_3_28480 Lactuca sativa HOM05D005504 ORTHO05D002688 8.6e-07 58.9 162 25.9
Medtr8g014565 Medicago truncatula HOM05D005504 ORTHO05D002688 1.1e-06 58.5 181 24.3
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-06 58.2 110 39.1
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-06 58.2 109 27.5
Medtr6g081975 Medicago truncatula HOM05D005504 ORTHO05D002688 1.5e-06 58.2 157 26.1
Medtr7g110505 Medicago truncatula HOM05D005504 ORTHO05D002688 1.5e-06 58.2 177 24.9
Phvul.001G100600 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.5e-06 58.2 88 33.0
Hma1.2p1_1271F.1_g271740 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.9e-06 57.8 52 55.8
Hma1.2p1_2873F.1_g329710 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 1.9e-06 57.8 52 55.8
Phvul.009G207400 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.9e-06 57.8 116 27.6
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 2.5e-06 57.4 69 40.6
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 2.5e-06 57.4 154 24.7
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-06 57.4 230 23.5
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-06 57.0 163 26.4
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 4.3e-06 56.6 222 22.1
Aqoxy3G01675 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.3e-06 56.6 262 25.6
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 4.3e-06 56.6 230 23.0
arahy.Tifrunner.gnm1.ann1.S358G7 Arachis hypogaea HOM05D000034 ORTHO05D002688 4.3e-06 56.6 120 25.8
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 4.3e-06 56.6 153 24.8
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.3e-06 56.6 204 26.0
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 5.6e-06 56.2 222 22.1
Medtr2g076190 Medicago truncatula HOM05D005504 ORTHO05D002688 5.6e-06 56.2 183 23.0
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 5.6e-06 56.2 113 31.9
arahy.Tifrunner.gnm1.ann1.W93U0I Arachis hypogaea HOM05D000034 ORTHO05D002688 7.3e-06 55.8 154 24.0
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 9.5e-06 55.5 69 39.1
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 9.5e-06 55.5 124 29.0
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 9.5e-06 55.5 158 25.3
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 9.5e-06 55.5 134 30.6


User provided reference genes

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