Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 4.2e-227 792.0 770 100.0
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.0e-201 707.6 768 95.4
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.4e-123 445.7 769 52.5
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.7e-90 338.2 769 62.4
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 5.0e-87 326.6 737 59.2
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 8.0e-85 319.3 769 56.6
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 4.0e-84 317.0 763 58.1
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 8.3e-82 309.3 768 49.9
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 5.9e-80 303.1 738 53.0
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 4.3e-78 297.0 769 48.0
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 1.6e-77 295.0 767 44.5
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 2.8e-77 294.3 767 54.0
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 8.0e-77 292.7 768 50.9
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 5.2e-76 290.0 768 51.0
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 5.2e-76 290.0 766 54.4
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 2.4e-73 281.2 756 52.6
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 7.8e-72 276.2 768 51.7
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.5e-70 271.2 752 41.9
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 7.3e-70 269.6 753 47.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 3.6e-69 267.3 758 52.9
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.3e-68 264.6 759 47.4
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 5.8e-67 260.0 761 59.4
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 5.8e-67 260.0 751 56.9
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 7.5e-67 259.6 765 42.0
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.3e-66 258.8 765 52.0
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.1e-65 255.8 757 51.3
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-65 255.0 749 43.8
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.1e-65 253.8 749 42.3
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.6e-64 251.9 759 48.9
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 2.7e-64 251.1 742 42.0
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.0e-63 249.2 774 54.0
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.9e-62 245.0 777 40.7
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.9e-62 245.0 754 56.8
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 4.3e-62 243.8 727 48.7
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 2.8e-61 241.1 685 62.6
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 4.7e-61 240.4 765 53.1
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 1.1e-60 239.2 768 47.3
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.4e-60 238.8 765 47.6
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.8e-60 238.4 752 48.4
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 2.3e-60 238.0 756 43.9
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 6.8e-60 236.5 768 53.0
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 3.8e-58 230.7 769 55.0
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.7e-56 224.6 769 50.3
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 4.6e-56 223.8 715 65.2
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 1.1e-52 212.6 738 43.1
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 3.4e-51 207.6 382 55.5
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.2e-50 204.9 774 49.9
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 8.4e-50 203.0 739 48.0
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 1.1e-49 202.6 245 56.7
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.2e-48 199.1 324 59.0
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.9e-46 191.8 768 49.3
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 2.5e-46 191.4 747 46.3
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.3e-46 191.0 209 56.9
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 3.6e-45 187.6 379 61.5
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.8e-44 185.3 766 44.0
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 6.9e-44 183.3 767 38.7
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 9.9e-43 179.5 767 46.8
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.7e-42 178.7 771 43.6
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 2.9e-42 177.9 768 40.9
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 3.5e-40 171.0 248 57.3
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 3.5e-40 171.0 738 41.2
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 4.6e-40 170.6 774 40.1
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 4.6e-40 170.6 752 44.5
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 4.6e-40 170.6 346 54.9
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.8e-39 168.7 749 46.9
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 3.0e-39 167.9 768 44.5
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 5.1e-39 167.2 376 44.1
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 5.1e-39 167.2 347 49.0
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 5.6e-38 163.7 768 40.9
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 1.3e-37 162.5 381 50.4
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 1.6e-37 162.2 340 59.1
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 4.0e-36 157.5 776 44.8
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 9.0e-36 156.4 383 45.7
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 5.8e-35 153.7 371 46.6
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 7.1e-33 146.7 768 36.7
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 7.1e-33 146.7 762 50.0
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.2e-32 146.0 379 48.8
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 2.7e-32 144.8 766 48.0
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 7.9e-32 143.3 387 55.0
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.3e-30 137.9 770 39.9
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 4.3e-30 137.5 774 40.1
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 5.6e-30 137.1 368 44.3
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 7.4e-30 136.7 197 57.9
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.4e-28 132.5 243 39.5
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.4e-28 132.5 763 41.5
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 1.2e-27 129.4 236 39.8
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 1.2e-27 129.4 236 39.8
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 2.0e-27 128.6 767 45.6
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 1.7e-26 125.6 755 46.0
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 3.8e-26 124.4 302 49.3
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 3.8e-26 124.4 381 46.5
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.1e-25 122.9 732 37.8
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 9.3e-25 119.8 759 39.3
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 9.3e-25 119.8 235 35.7
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 6.7e-23 113.6 379 46.2
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 3.3e-22 111.3 754 42.2
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.3e-21 109.4 171 45.6
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 4.8e-21 107.5 236 39.8
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 4.1e-20 104.4 782 44.5
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-19 102.8 181 39.8
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 2.9e-18 98.2 165 44.8
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 5.0e-18 97.4 763 40.1
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.9e-17 95.5 230 41.7
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.5e-17 95.1 90 60.0
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.1e-16 92.0 147 46.9
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 5.7e-14 84.0 108 50.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.7e-14 84.0 369 28.7
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.1e-12 78.2 68 66.2
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.0e-11 75.5 134 39.6
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 4.5e-11 74.3 99 44.4
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.9e-09 68.9 116 37.1
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 9.4e-09 66.6 404 34.4


User provided reference genes

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