Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.5e-98 362.1 178 100.0
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 3.6e-89 331.6 179 95.5
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 3.6e-89 331.6 179 95.5
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 2.9e-54 215.7 186 66.1
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 9.3e-53 210.7 185 65.9
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 2.5e-50 202.6 183 64.5
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 7.4e-50 201.1 180 62.2
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 7.4e-50 201.1 180 62.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 9.9e-47 190.7 165 62.4
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 1.3e-46 190.3 176 59.1
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 3.8e-46 188.7 114 83.3
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 6.4e-46 188.0 174 62.1
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 6.4e-46 188.0 187 57.8
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 8.4e-46 187.6 130 73.1
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.4e-45 186.8 180 58.3
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 1.9e-45 186.4 134 73.1
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 2.4e-45 186.0 153 66.0
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 5.5e-45 184.9 175 60.6
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 9.3e-45 184.1 124 75.0
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 1.2e-44 183.7 156 65.4
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.6e-44 183.3 183 60.1
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 2.1e-44 183.0 182 59.3
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.1e-44 183.0 193 57.0
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 2.7e-44 182.6 244 48.4
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 3.5e-44 182.2 147 63.9
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 3.5e-44 182.2 159 66.0
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 6.0e-44 181.4 128 75.0
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.3e-43 180.3 183 59.0
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 1.3e-43 180.3 156 62.2
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 2.3e-43 179.5 120 75.8
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 2.3e-43 179.5 199 53.8
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.9e-43 178.7 106 84.0
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 3.9e-43 178.7 138 69.6
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 6.7e-43 177.9 124 74.2
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 1.9e-42 176.4 138 62.3
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 1.9e-42 176.4 184 54.9
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 1.9e-42 176.4 124 73.4
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 2.5e-42 176.0 166 60.2
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 3.3e-42 175.6 189 55.0
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 3.3e-42 175.6 104 83.7
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 4.3e-42 175.3 138 63.0
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 7.4e-42 174.5 124 71.0
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 1.3e-41 173.7 184 54.3
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.6e-41 173.3 127 66.9
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 1.6e-41 173.3 127 65.4
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 1.6e-41 173.3 147 61.2
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 3.7e-41 172.2 105 77.1
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 3.7e-41 172.2 122 71.3
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 3.7e-41 172.2 158 60.1
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 4.8e-41 171.8 127 66.1
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 4.8e-41 171.8 182 53.3
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 8.2e-41 171.0 142 62.7
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 8.2e-41 171.0 138 60.9
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 8.2e-41 171.0 138 60.9
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 8.2e-41 171.0 181 55.8
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 1.1e-40 170.6 112 76.8
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.1e-40 170.6 140 61.4
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 1.1e-40 170.6 122 70.5
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 1.4e-40 170.2 114 73.7
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.4e-40 170.2 120 74.2
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.4e-40 170.2 105 79.0
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 1.4e-40 170.2 173 56.1
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 1.4e-40 170.2 112 76.8
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 1.8e-40 169.9 122 70.5
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 2.4e-40 169.5 177 55.4
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 2.4e-40 169.5 137 62.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 4.0e-40 168.7 121 69.4
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 5.3e-40 168.3 138 58.7
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 5.3e-40 168.3 138 60.1
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 9.0e-40 167.5 151 59.6
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 1.5e-39 166.8 118 69.5
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 2.0e-39 166.4 163 57.7
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 2.0e-39 166.4 128 67.2
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 2.6e-39 166.0 107 76.6
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 2.6e-39 166.0 149 65.1
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 2.6e-39 166.0 149 65.1
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 2.6e-39 166.0 149 65.1
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 3.4e-39 165.6 107 74.8
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 3.4e-39 165.6 136 66.9
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 7.6e-39 164.5 131 64.1
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.7e-38 163.3 181 53.0
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 3.8e-38 162.2 107 71.0
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 3.8e-38 162.2 107 71.0
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 3.8e-38 162.2 112 67.0
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 4.9e-38 161.8 116 65.5
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 4.9e-38 161.8 120 68.3
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 4.9e-38 161.8 101 77.2
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.5e-38 161.4 180 55.0
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 8.4e-38 161.0 116 70.7
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 1.1e-37 160.6 103 75.7
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 1.1e-37 160.6 152 57.9
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 1.4e-37 160.2 145 61.4
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 9.3e-37 157.5 114 68.4
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 9.3e-37 157.5 85 89.4
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 2.1e-36 156.4 90 83.3
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 2.5e-34 149.4 84 83.3
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.8e-33 146.0 103 67.0
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.2e-31 140.6 87 79.3
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 3.4e-31 139.0 102 61.8
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.3e-27 127.1 115 53.0
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.3e-27 127.1 115 53.0
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.9e-26 123.2 101 55.4
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 2.5e-26 122.9 115 50.4
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 2.4e-24 116.3 114 51.8
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 2.3e-11 73.2 54 64.8


User provided reference genes

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