Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048827 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D007928 1.1e-150 536.6 261 100.0
Actinidia25687 Actinidia chinensis HOM05D002027 ORTHO05D007928 4.9e-95 351.7 248 69.8
Rhsim06G0100500 Rhododendron simsii HOM05D002027 ORTHO05D007928 1.4e-86 323.6 248 62.9
Dinv22945 Davidia involucrata HOM05D002027 ORTHO05D007928 2.1e-85 319.7 248 65.3
TAR636G2984 Trochodendron aralioides HOM05D002027 ORTHO05D007928 2.8e-82 309.3 249 61.8
Cfa017863 Carpinus fangiana HOM05D000120 ORTHO05D007928 1.5e-80 303.5 248 60.9
Haze_18309 Corylus avellana HOM05D002027 ORTHO05D007928 4.5e-80 302.0 248 60.1
Duzib168G1118 Durio zibethinus HOM05D002027 ORTHO05D007928 1.2e-77 293.9 250 58.4
Nn8g38643 Nelumbo nucifera HOM05D002027 ORTHO05D007928 2.1e-77 293.1 249 57.8
GSVIVG01035482001 Vitis vinifera HOM05D002027 ORTHO05D007928 5.1e-76 288.5 248 58.9
Manes.03G054000 Manihot esculenta HOM05D002027 ORTHO05D007928 8.8e-76 287.7 248 56.9
Potri.018G048500 Populus trichocarpa HOM05D002027 ORTHO05D007928 1.7e-74 283.5 248 56.5
Thecc.09G064800 Theobroma cacao HOM05D002027 ORTHO05D007928 1.8e-73 280.0 250 56.0
Potri.006G219600 Populus trichocarpa HOM05D002027 ORTHO05D007928 2.4e-73 279.6 251 56.2
Sabra06G0169500 Salix brachista HOM05D002027 ORTHO05D007928 3.4e-72 275.8 251 55.4
CiPaw.16G067400 Carya illinoinensis HOM05D002027 ORTHO05D007928 2.2e-71 273.1 240 57.1
Sabra18G0046200 Salix brachista HOM05D002027 ORTHO05D007928 2.2e-71 273.1 248 54.8
Gohir.D06G079600 Gossypium hirsutum HOM05D002027 ORTHO05D007928 1.0e-68 264.2 250 54.0
Gorai.010G092800 Gossypium raimondii HOM05D002027 ORTHO05D007928 1.0e-68 264.2 250 54.0
CANSAT25G2836 Cannabis sativa HOM05D002027 ORTHO05D007928 1.4e-68 263.8 249 56.6
vmacro12513 Vaccinium macrocarpon HOM05D002027 ORTHO05D007928 3.9e-68 262.3 225 58.7
Gohir.A06G080100 Gossypium hirsutum HOM05D002027 ORTHO05D007928 5.1e-68 261.9 250 53.6
Prupe.1G403200 Prunus persica HOM05D002027 ORTHO05D007928 8.8e-68 261.2 241 55.6
Lj7A214T27 Lonicera japonica HOM05D002027 ORTHO05D007928 1.5e-67 260.4 252 58.3
Nn6g35623 Nelumbo nucifera HOM05D002027 ORTHO05D007928 3.3e-67 259.2 249 54.2
ClCG05G015810 Citrullus lanatus HOM05D002027 ORTHO05D007928 7.4e-67 258.1 251 49.4
Lj7A212G30 Lonicera japonica HOM05D002027 ORTHO05D007928 3.7e-66 255.8 251 57.8
Atru.chr7.1835 Acer truncatum HOM05D002027 ORTHO05D007928 1.8e-65 253.4 248 52.0
Nitab4.5_0006220g0040 Nicotiana tabacum HOM05D002027 ORTHO05D007928 1.6e-64 250.4 248 51.6
Cc08_g01050 Coffea canephora HOM05D002027 ORTHO05D007928 4.5e-64 248.8 240 54.6
PGSC0003DMG400024394 Solanum tuberosum HOM05D002027 ORTHO05D007928 6.5e-63 245.0 248 52.0
Ciclev10008420m.g Citrus clementina HOM05D002027 ORTHO05D007928 3.2e-62 242.7 248 50.8
RcHm_v2.0_Chr6g0311981 Rosa chinensis HOM05D002027 ORTHO05D007928 9.4e-62 241.1 248 50.4
Peaxi162Scf00486g00315 Petunia axillaris HOM05D002027 ORTHO05D007928 3.6e-61 239.2 240 52.1
MELO3C016918.2 Cucumis melo HOM05D002027 ORTHO05D007928 1.4e-60 237.3 252 48.0
MBI19_g44268_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D007928 1.4e-60 237.3 250 50.8
CAN.G56.2 Capsicum annuum HOM05D002027 ORTHO05D007928 1.8e-60 236.9 248 51.2
Nitab4.5_0001576g0010 Nicotiana tabacum HOM05D002027 ORTHO05D007928 4.0e-60 235.7 248 51.2
Sed0020055 Sechium edule HOM05D002027 ORTHO05D007928 5.2e-60 235.3 251 47.4
Oeu024211.1 Olea europaea HOM05D002027 ORTHO05D007928 3.3e-59 232.6 251 51.4
Oeu024212.1 Olea europaea HOM05D002027 ORTHO05D007928 3.3e-59 232.6 251 51.4
Gohir.A07G019100 Gossypium hirsutum HOM05D002027 ORTHO05D007928 1.7e-58 230.3 243 51.0
Sopen08g016820 Solanum pennellii HOM05D002027 ORTHO05D007928 1.7e-58 230.3 248 50.4
MSTRG.11630 Avicennia marina HOM05D002027 ORTHO05D007928 2.2e-58 229.9 251 49.4
FAN20G1907 Fragaria x ananassa HOM05D000120 ORTHO05D000068 2.2e-58 229.9 248 48.4
CsaV3_4G036100 Cucumis sativus L. HOM05D002027 ORTHO05D007928 2.8e-58 229.6 250 46.4
Solyc08g061480.3 Solanum lycopersicum HOM05D002027 ORTHO05D007928 1.1e-57 227.6 248 50.0
FvH4_2g30870 Fragaria vesca HOM05D002027 ORTHO05D007928 2.4e-57 226.5 248 48.0
FAN24G3017 Fragaria x ananassa HOM05D002027 ORTHO05D007928 2.0e-56 223.4 253 47.0
FAN27G2495 Fragaria x ananassa HOM05D002027 ORTHO05D007928 2.0e-56 223.4 248 48.0
Gorai.001G019600 Gossypium raimondii HOM05D002027 ORTHO05D007928 4.5e-56 222.2 242 50.0
Oeu022307.1 Olea europaea HOM05D002027 ORTHO05D007928 7.7e-56 221.5 251 49.0
DCAR_003721 Daucus carota HOM05D002027 ORTHO05D007928 1.3e-55 220.7 248 50.4
Aqoxy7G01035 Aquilegia oxysepala HOM05D002027 ORTHO05D007928 1.7e-55 220.3 248 45.6
MD15G1048900 Malus domestica HOM05D002027 ORTHO05D007928 3.2e-54 216.1 248 48.0
TWI63G1127 Tripterygium wilfordii HOM05D002027 ORTHO05D007928 3.2e-54 216.1 248 46.4
MD08G1072900 Malus domestica HOM05D002027 ORTHO05D007928 9.4e-54 214.5 248 46.8
Cpa.g.sc126.10 Carica papaya HOM05D002027 ORTHO05D007928 6.1e-53 211.8 228 53.1
SGA_v2.0_scaffold20G09151 Striga asiatica HOM05D002027 ORTHO05D007928 1.4e-52 210.7 252 46.8
TWI34G0836 Tripterygium wilfordii HOM05D002027 ORTHO05D007928 3.0e-52 209.5 240 47.5
Migut.A00065 Erythranthe guttata HOM05D002027 ORTHO05D007928 6.8e-52 208.4 252 45.6
Sc06g0000160 Simmondsia chinensis HOM05D002027 ORTHO05D007928 6.8e-52 208.4 240 44.6
SalBow4G1403 Salvia bowleyana HOM05D002027 ORTHO05D007928 1.5e-51 207.2 252 46.0
TAR624G0349 Trochodendron aralioides HOM05D000120 ORTHO05D007928 7.0e-49 198.4 189 54.5
PSO724G0582 Papaver somniferum HOM05D002027 ORTHO05D007928 5.9e-48 195.3 248 44.0
PSO135G0370 Papaver somniferum HOM05D002027 ORTHO05D007928 2.9e-47 193.0 249 43.4
Hund25572 Selenicereus undatus HOM05D002027 ORTHO05D007928 2.9e-47 193.0 246 42.7
Ca_13117_v3 Cicer arietinum L. HOM05D002027 ORTHO05D007928 1.8e-44 183.7 254 42.5
THA.LOC104803709 Tarenaya hassleriana HOM05D002027 ORTHO05D007928 5.7e-43 178.7 248 41.9
COL.COLO4_21153 Corchorus olitorius HOM05D002027 ORTHO05D007928 4.9e-42 175.6 169 52.1
PGR004G1932 Punica granatum HOM05D002027 ORTHO05D007928 9.2e-41 171.4 249 39.4
Lalb_Chr14g0366421 Lupinus albus HOM05D002027 ORTHO05D007928 5.9e-40 168.7 250 40.0
DCAR_001241 Daucus carota HOM05D002027 ORTHO05D007928 7.7e-40 168.3 244 43.4
Ah.12g061280 Amaranthus hybridus HOM05D002027 ORTHO05D007928 1.9e-38 163.7 245 38.8
HanXRQChr10g0309891 Helianthus annuus HOM05D002027 ORTHO05D007928 4.7e-37 159.1 240 41.7
Psat6g021720 Pisum sativum HOM05D002027 ORTHO05D007928 2.3e-36 156.8 251 39.8
VMungo0647G0809 Vigna mungo HOM05D002027 ORTHO05D007928 1.5e-35 154.1 212 43.9
AUR62037722 Chenopodium quinoa HOM05D002027 ORTHO05D007928 4.4e-35 152.5 246 37.8
Glyma.14G098100 Glycine max HOM05D002027 ORTHO05D007928 9.8e-35 151.4 250 38.4
Medtr1g015700 Medicago truncatula HOM05D002027 ORTHO05D007928 9.8e-35 151.4 249 39.4
EL10Ac2g02409 Beta vulgaris HOM05D002027 ORTHO05D007928 1.7e-34 150.6 248 36.7
Glyma.17G226600 Glycine max HOM05D002027 ORTHO05D007928 1.7e-34 150.6 211 43.1
Phvul.001G037700 Phaseolus vulgaris HOM05D002027 ORTHO05D007928 4.9e-34 149.1 195 43.6
ATR0598G318 Amborella trichopoda HOM05D002027 ORTHO05D007928 8.3e-34 148.3 224 42.9
AUR62020283 Chenopodium quinoa HOM05D002027 ORTHO05D007928 3.2e-33 146.4 247 37.7
ECA234G4199 Erigeron canadensis HOM05D002027 ORTHO05D007928 7.0e-33 145.2 234 36.8
TAR383G0615 Trochodendron aralioides HOM05D002027 ORTHO05D007928 7.0e-33 145.2 104 63.5
arahy.Tifrunner.gnm1.ann1.AYFT4X Arachis hypogaea HOM05D002027 ORTHO05D007928 3.5e-32 142.9 262 37.8
Dinv41850 Davidia involucrata HOM05D000120 ORTHO05D000068 3.5e-32 142.9 90 71.1
arahy.Tifrunner.gnm1.ann1.82L1EP Arachis hypogaea HOM05D002027 ORTHO05D007928 7.8e-32 141.7 262 37.8
Lj5g0014128 Lotus japonicus HOM05D002027 ORTHO05D007928 1.7e-31 140.6 252 37.3
Gohir.D07G018900 Gossypium hirsutum HOM05D002027 ORTHO05D007928 2.3e-31 140.2 171 47.4
HPP92_009227 Vanilla planifolia HOM05D002027 ORTHO05D007928 8.6e-31 138.3 216 39.4
Os02g0778500 Oryza sativa ssp. japonica HOM05D002027 ORTHO05D007928 6.2e-29 132.1 252 31.7
TPR.G22965 Trifolium pratense HOM05D002027 ORTHO05D007928 2.9e-26 123.2 216 37.5
Zm00001eb256920 Zea mays HOM05D002027 ORTHO05D007928 1.2e-24 117.9 249 31.3
AL4G18930 Arabidopsis lyrata HOM05D002027 ORTHO05D007928 2.7e-24 116.7 208 36.5
AT2G26310 Arabidopsis thaliana HOM05D002027 ORTHO05D007928 3.9e-23 112.8 217 36.9
Sp4g06660 Schrenkiella parvula HOM05D002027 ORTHO05D007928 3.9e-23 112.8 213 33.8
Duzib150G1126 Durio zibethinus HOM05D002027 ORTHO05D007928 6.6e-23 112.1 136 47.1
CARHR115240 Cardamine hirsuta HOM05D002027 ORTHO05D007928 1.1e-22 111.3 204 36.8
Thhalv10001976m.g Eutrema salsugineum HOM05D002027 ORTHO05D007928 2.5e-22 110.2 223 34.5
Lsat_1_v5_gn_5_79360 Lactuca sativa HOM05D002027 ORTHO05D007928 9.5e-22 108.2 240 32.9
Carub.0004s0620 Capsella rubella HOM05D002027 ORTHO05D007928 2.9e-18 96.7 209 34.9
unitig_748.g7540 Utricularia gibba HOM05D002027 ORTHO05D007928 1.3e-15 87.8 183 33.9
BcaC02g08291 Brassica carinata HOM05D002027 ORTHO05D007928 2.5e-14 83.6 214 33.6
C04p56040 Brassica napus HOM05D002027 ORTHO05D007928 2.5e-14 83.6 214 33.6
BolC4t27137H Brassica oleracea HOM05D002027 ORTHO05D007928 2.5e-14 83.6 214 33.6
Aa31LG5G9500 Aethionema arabicum HOM05D002027 ORTHO05D007016 2.8e-13 80.1 112 41.1
A04p20340 Brassica napus HOM05D002027 ORTHO05D007928 6.2e-13 79.0 211 33.6
TPR.G13059 Trifolium pratense HOM05D002027 ORTHO05D007928 3.1e-12 76.6 79 43.0
BcaB06g28094 Brassica carinata HOM05D002027 ORTHO05D007928 4.0e-12 76.3 216 30.1
Os06g0203600 Oryza sativa ssp. japonica HOM05D002027 ORTHO05D007928 8.9e-12 75.1 230 26.1
MBI19_g43890_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D007928 3.8e-10 69.7 56 48.2
BraA04t17613Z Brassica rapa HOM05D002027 ORTHO05D007928 8.4e-10 68.6 211 32.7
SEGI_03719 Sequoiadendron giganteum HOM05D002027 ORTHO05D007928 2.3e-07 60.5 123 33.3
CDE06G1407 Ceratophyllum demersum HOM05D000833 ORTHO05D007016 7.3e-06 55.5 65 40.0


User provided reference genes

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