Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048821 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 5.4e-47 190.7 97 100.0
Dinv23490 Davidia involucrata HOM05D006691 ORTHO05D007620 3.7e-19 98.2 100 59.0
Dinv42040 Davidia involucrata HOM05D006691 ORTHO05D007620 1.5e-17 92.8 99 55.6
Potri.009G119900 Populus trichocarpa HOM05D006691 ORTHO05D007620 2.0e-17 92.4 101 55.4
CSS0036321 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 5.8e-17 90.9 97 58.8
CSS0004191 Camellia sinensis var. sinensis HOM05D006691 ORTHO05D007620 1.0e-16 90.1 97 58.8
TWI79G1416 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 1.7e-16 89.4 97 51.5
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 4.9e-16 87.8 97 56.7
TWI31G1476 Tripterygium wilfordii HOM05D006691 ORTHO05D007620 6.5e-16 87.4 97 51.5
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.9e-15 85.9 99 52.5
Prupe.8G091200 Prunus persica HOM05D006691 ORTHO05D007620 3.2e-15 85.1 100 53.0
MD10G1069300 Malus domestica HOM05D006691 ORTHO05D007620 4.2e-15 84.7 100 53.0
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 5.5e-15 84.3 100 52.0
Manes.11G091700 Manihot esculenta HOM05D006691 ORTHO05D007620 9.3e-15 83.6 96 51.0
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.6e-14 82.8 100 51.0
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.6e-14 81.3 101 50.5
Peaxi162Scf00016g00429 Petunia axillaris HOM05D006691 ORTHO05D007620 4.6e-14 81.3 100 50.0
Phvul.011G210100 Phaseolus vulgaris HOM05D006691 ORTHO05D007620 4.6e-14 81.3 97 49.5
FAN20G2766 Fragaria x ananassa HOM05D006691 ORTHO05D007620 7.9e-14 80.5 101 52.5
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 7.9e-14 80.5 101 51.5
QL11p045203 Quercus lobata HOM05D006691 ORTHO05D007620 7.9e-14 80.5 100 50.0
Ciclev10030122m.g Citrus clementina HOM05D006691 ORTHO05D007620 1.0e-13 80.1 100 48.0
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 1.0e-13 80.1 100 50.0
Lj1g0004010 Lotus japonicus HOM05D006691 ORTHO05D007620 1.0e-13 80.1 99 48.5
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 1.0e-13 80.1 101 52.5
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 1.8e-13 79.3 101 50.5
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 1.8e-13 79.3 101 50.5
Eucgr.I01291 Eucalyptus grandis HOM05D006691 ORTHO05D007620 2.3e-13 79.0 101 47.5
GSVIVG01023821001 Vitis vinifera HOM05D006691 ORTHO05D007620 2.3e-13 79.0 98 48.0
TAR628G0615 Trochodendron aralioides HOM05D006691 ORTHO05D007620 3.0e-13 78.6 99 48.5
Thecc.02G080700 Theobroma cacao HOM05D006691 ORTHO05D007620 3.9e-13 78.2 99 50.5
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 6.7e-13 77.4 105 47.6
Manes.04G087299 Manihot esculenta HOM05D006691 ORTHO05D007620 6.7e-13 77.4 97 48.5
Glyma.13G201100 Glycine max HOM05D006691 ORTHO05D007620 8.7e-13 77.0 98 51.0
Rhsim05G0071400 Rhododendron simsii HOM05D006691 ORTHO05D007620 8.7e-13 77.0 95 51.6
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.5e-12 76.3 98 48.0
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.9e-12 75.9 98 46.9
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 7.4e-12 73.9 96 51.0
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.3e-11 73.2 98 44.9
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 1.3e-11 73.2 94 50.0
CANSAT11G0932 Cannabis sativa HOM05D006691 ORTHO05D007620 1.6e-11 72.8 95 44.2
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 2.8e-11 72.0 94 48.9
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 3.7e-11 71.6 97 45.4
CAN.G1544.5 Capsicum annuum HOM05D006691 ORTHO05D007620 4.8e-11 71.2 99 46.5
Gohir.D02G217900 Gossypium hirsutum HOM05D006691 ORTHO05D007620 6.3e-11 70.9 94 48.9
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 8.2e-11 70.5 97 45.4
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 1.1e-10 70.1 98 49.0
Medtr8g037800 Medicago truncatula HOM05D006691 ORTHO05D007620 1.8e-10 69.3 97 45.4
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 1.8e-10 69.3 99 44.4
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 2.4e-10 68.9 97 43.3
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 4.1e-10 68.2 100 47.0
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla HOM05D006691 ORTHO05D007620 4.1e-10 68.2 98 46.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 5.3e-10 67.8 103 46.6
Psat4g192840 Pisum sativum HOM05D006691 ORTHO05D007620 5.3e-10 67.8 99 44.4
Lj3g0013236 Lotus japonicus HOM05D006691 ORTHO05D007620 9.0e-10 67.0 99 47.5
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 9.0e-10 67.0 99 44.4
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 1.5e-09 66.2 98 43.9
Aqoxy5G01556 Aquilegia oxysepala HOM05D006691 ORTHO05D007620 2.6e-09 65.5 99 43.4
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 3.4e-09 65.1 96 41.7
Gohir.A13G032600 Gossypium hirsutum HOM05D006691 ORTHO05D007620 4.5e-09 64.7 93 41.9
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 1.0e-08 63.5 96 40.6
PGR042G3893 Punica granatum HOM05D006691 ORTHO05D007620 2.9e-08 62.0 102 45.1
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 5.0e-08 61.2 96 44.8
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 5.0e-08 61.2 96 42.7
CiPaw.05G069300 Carya illinoinensis HOM05D006691 ORTHO05D007620 8.5e-08 60.5 68 47.1
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 8.5e-08 60.5 100 44.0
CiPaw.05G069400 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.1e-07 60.1 67 50.7
Peaxi162Scf00684g00234 Petunia axillaris HOM05D006691 ORTHO05D007620 3.2e-07 58.5 96 40.6
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea HOM05D006691 ORTHO05D007620 4.2e-07 58.2 108 37.0
Eucgr.G01694 Eucalyptus grandis HOM05D006691 ORTHO05D007620 4.2e-07 58.2 103 38.8
CiPaw.05G069100 Carya illinoinensis HOM05D006691 ORTHO05D007620 5.5e-07 57.8 67 49.3
THA.LOC104819621 Tarenaya hassleriana HOM05D006691 ORTHO05D007620 1.6e-06 56.2 93 38.7
MBI16_g36843_MAGBIO Magnolia biondii HOM05D006691 ORTHO05D007620 2.1e-06 55.8 98 38.8
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 2.7e-06 55.5 100 40.0
Glyma.12G235600 Glycine max HOM05D006691 ORTHO05D007620 3.6e-06 55.1 76 50.0
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea HOM05D006691 ORTHO05D007620 7.9e-06 53.9 108 35.2


User provided reference genes

Program Settings