Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048808 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.7e-39 166.0 114 100.0
CSS0011685 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 8.3e-39 163.7 114 98.2
CSS0034746 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 8.3e-39 163.7 114 98.2
CSS0039761 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 8.3e-39 163.7 114 98.2
CSS0043613 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 8.3e-39 163.7 114 98.2
CSS0002691 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 4.1e-38 161.4 114 97.4
CSS0021625 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 7.1e-38 160.6 114 97.4
CSS0027278 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.2e-37 159.8 114 97.4
CSS0041878 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 1.2e-37 159.8 114 94.7
Dinv27907 Davidia involucrata HOM05D002792 ORTHO05D003039 6.9e-17 90.9 57 78.9
TAR626G1718 Trochodendron aralioides HOM05D002792 ORTHO05D003039 2.0e-16 89.4 54 74.1
Actinidia30279 Actinidia chinensis HOM05D002792 ORTHO05D003039 4.5e-16 88.2 87 58.6
vmacro11056 Vaccinium macrocarpon HOM05D002792 ORTHO05D003039 9.9e-16 87.0 54 79.6
Hma1.2p1_0049F.1_g028510 Hydrangea macrophylla HOM05D002792 ORTHO05D003039 2.2e-15 85.9 56 76.8
Rhsim02G0176900 Rhododendron simsii HOM05D002792 ORTHO05D003039 8.4e-15 84.0 52 78.8
CiPaw.08G026100 Carya illinoinensis HOM05D002792 ORTHO05D003039 1.4e-14 83.2 55 76.4
GSVIVG01035616001 Vitis vinifera HOM05D002792 ORTHO05D003039 1.4e-14 83.2 54 75.9
Cc08_g09690 Coffea canephora HOM05D002792 ORTHO05D003039 3.2e-14 82.0 87 51.7
CSS0012947 Camellia sinensis var. sinensis HOM05D002792 ORTHO05D003039 2.1e-13 79.3 75 62.7
Oeu043885.1 Olea europaea HOM05D002792 ORTHO05D003039 4.6e-13 78.2 87 51.7
Sc23g0005200 Simmondsia chinensis HOM05D002792 ORTHO05D003039 6.0e-13 77.8 53 67.9
Prupe.1G447600 Prunus persica HOM05D002792 ORTHO05D003039 1.8e-12 76.3 87 49.4
Lj8A578G16 Lonicera japonica HOM05D002792 ORTHO05D003039 2.3e-12 75.9 87 48.3
Ciclev10009570m.g Citrus clementina HOM05D002792 ORTHO05D003039 3.0e-12 75.5 55 72.7
Thecc.09G045800 Theobroma cacao HOM05D002792 ORTHO05D003039 5.1e-12 74.7 53 69.8
MELO3C003464.2 Cucumis melo HOM05D002792 ORTHO05D003039 8.7e-12 73.9 53 69.8
CsaV3_3G048550 Cucumis sativus L. HOM05D002792 ORTHO05D003039 8.7e-12 73.9 53 69.8
SalBow1G0964 Salvia bowleyana HOM05D002792 ORTHO05D003039 8.7e-12 73.9 86 46.5
FvH4_2g35470 Fragaria vesca HOM05D002792 ORTHO05D003039 1.1e-11 73.6 87 48.3
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.1e-11 73.6 87 48.3
Lj8C574G4 Lonicera japonica HOM05D002792 ORTHO05D003039 1.1e-11 73.6 51 68.6
RcHm_v2.0_Chr6g0306411 Rosa chinensis HOM05D002792 ORTHO05D003039 1.1e-11 73.6 88 51.1
Sed0001182 Sechium edule HOM05D002792 ORTHO05D003039 1.1e-11 73.6 53 67.9
Lj1g0023402 Lotus japonicus HOM05D002792 ORTHO05D003039 1.5e-11 73.2 55 65.5
Nn2g11610 Nelumbo nucifera HOM05D002792 ORTHO05D003039 2.5e-11 72.4 87 47.1
Phvul.009G110200 Phaseolus vulgaris HOM05D002792 ORTHO05D003039 2.5e-11 72.4 55 69.1
FAN15G1596 Fragaria x ananassa HOM05D002792 ORTHO05D003039 4.3e-11 71.6 88 50.0
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 5.6e-11 71.2 48 62.5
Lsat_1_v5_gn_5_33680 Lactuca sativa HOM05D002792 ORTHO05D003039 5.6e-11 71.2 53 64.2
MD15G1092700 Malus domestica HOM05D002792 ORTHO05D003039 5.6e-11 71.2 48 70.8
Medtr3g109700 Medicago truncatula HOM05D002792 ORTHO05D003039 5.6e-11 71.2 54 64.8
Potri.006G237900 Populus trichocarpa HOM05D002792 ORTHO05D003039 5.6e-11 71.2 54 66.7
Atru.chr7.2082 Acer truncatum HOM05D002792 ORTHO05D003039 7.4e-11 70.9 57 61.4
QL12p041309 Quercus lobata HOM05D002792 ORTHO05D003039 1.3e-10 70.1 58 63.8
ClCG11G015150 Citrullus lanatus HOM05D002792 ORTHO05D003039 1.6e-10 69.7 53 66.0
Glyma.04G084600 Glycine max HOM05D002792 ORTHO05D003039 1.6e-10 69.7 53 64.2
CANSAT25G1031 Cannabis sativa HOM05D002792 ORTHO05D003039 2.8e-10 68.9 50 66.0
Glyma.06G086200 Glycine max HOM05D002792 ORTHO05D003039 2.8e-10 68.9 55 65.5
Sabra06G0186200 Salix brachista HOM05D002792 ORTHO05D003039 2.8e-10 68.9 54 64.8
arahy.Tifrunner.gnm1.ann1.FW97GV Arachis hypogaea HOM05D002792 ORTHO05D003039 3.6e-10 68.6 41 75.6
Eucgr.C00554 Eucalyptus grandis HOM05D002792 ORTHO05D003039 3.6e-10 68.6 46 63.0
HanXRQChr16g0509381 Helianthus annuus HOM05D002792 ORTHO05D003039 3.6e-10 68.6 53 64.2
EL10Ac2g04008 Beta vulgaris HOM05D002792 ORTHO05D003039 4.8e-10 68.2 42 73.8
Eucgr.C00600 Eucalyptus grandis HOM05D002792 ORTHO05D003039 4.8e-10 68.2 42 66.7
Lalb_Chr08g0243041 Lupinus albus HOM05D002792 ORTHO05D003039 4.8e-10 68.2 43 69.8
Manes.03G059000 Manihot esculenta HOM05D002792 ORTHO05D003039 4.8e-10 68.2 55 63.6
Hund19508 Selenicereus undatus HOM05D002792 ORTHO05D003039 4.8e-10 68.2 87 43.7
PGSC0003DMG400002231 Solanum tuberosum HOM05D002792 ORTHO05D003039 4.8e-10 68.2 76 48.7
arahy.Tifrunner.gnm1.ann1.GFJ9I4 Arachis hypogaea HOM05D002792 ORTHO05D003039 6.2e-10 67.8 39 76.9
Nitab4.5_0001515g0040 Nicotiana tabacum HOM05D002792 ORTHO05D003039 6.2e-10 67.8 48 62.5
Eucgr.C02937 Eucalyptus grandis HOM05D002792 ORTHO05D003039 8.1e-10 67.4 42 66.7
CAN.G400.15 Capsicum annuum HOM05D002792 ORTHO05D003039 1.4e-09 66.6 76 44.7
Solyc08g066540.3 Solanum lycopersicum HOM05D002792 ORTHO05D003039 1.4e-09 66.6 72 50.0
Peaxi162Scf00227g00109 Petunia axillaris HOM05D002792 ORTHO05D003039 1.8e-09 66.2 42 69.0
Psat5g021080 Pisum sativum HOM05D002792 ORTHO05D003039 3.1e-09 65.5 46 63.0
PGR031G0555 Punica granatum HOM05D002792 ORTHO05D003039 3.1e-09 65.5 54 59.3
Sopen08g020380 Solanum pennellii HOM05D002792 ORTHO05D003039 3.1e-09 65.5 79 45.6
THA.LOC104803806 Tarenaya hassleriana HOM05D002792 ORTHO05D003039 5.3e-09 64.7 54 59.3
Nitab4.5_0003794g0060 Nicotiana tabacum HOM05D002792 ORTHO05D003039 1.2e-08 63.5 48 58.3
Gorai.009G049500 Gossypium raimondii HOM05D002792 ORTHO05D003039 1.5e-08 63.2 54 64.8
AUR62042437 Chenopodium quinoa HOM05D002792 ORTHO05D003039 4.5e-08 61.6 45 64.4
AUR62009270 Chenopodium quinoa HOM05D002792 ORTHO05D003039 5.8e-08 61.2 45 64.4
PSO210G0529 Papaver somniferum HOM05D002792 ORTHO05D003039 2.2e-07 59.3 91 41.8
Glyma.14G143300 Glycine max HOM05D002792 ORTHO05D003039 2.9e-07 58.9 43 62.8
PSO210G7550 Papaver somniferum HOM05D002792 ORTHO05D003039 2.9e-07 58.9 91 41.8
Aqoxy7G03895 Aquilegia oxysepala HOM05D002792 ORTHO05D003039 3.8e-07 58.5 54 51.9
Migut.E01530 Erythranthe guttata HOM05D002792 ORTHO05D003039 1.1e-06 57.0 43 55.8
CDE05G0140 Ceratophyllum demersum HOM05D002792 ORTHO05D003039 1.4e-06 56.6 50 48.0
TWI34G0935 Tripterygium wilfordii HOM05D002792 ORTHO05D003039 3.2e-06 55.5 36 63.9
unitig_37.g12923 Utricularia gibba HOM05D002792 ORTHO05D003039 7.1e-06 54.3 72 45.8
Ah.09g228070 Amaranthus hybridus HOM05D002792 ORTHO05D003039 9.3e-06 53.9 77 40.3


User provided reference genes

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