Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048788 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 5.5e-50 200.7 102 100.0
CSS0024852 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 2.0e-47 192.2 102 97.1
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla HOM05D006736 ORTHO05D008459 3.7e-22 108.2 101 65.3
CSS0010283 Camellia sinensis var. sinensis HOM05D006736 ORTHO05D008459 2.4e-21 105.5 92 63.0
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 2.9e-19 98.6 92 60.9
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 1.5e-18 96.3 85 62.4
Peaxi162Scf00047g02119 Petunia axillaris HOM05D006736 ORTHO05D008459 9.5e-18 93.6 79 67.1
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 1.0e-16 90.1 79 65.8
Migut.M00067 Erythranthe guttata HOM05D006736 ORTHO05D008459 8.9e-16 87.0 89 55.1
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 8.9e-16 87.0 79 64.6
TAR624G0983 Trochodendron aralioides HOM05D006736 ORTHO05D008459 1.7e-14 82.8 89 56.2
Peaxi162Scf01164g00020 Petunia axillaris HOM05D006736 ORTHO05D008459 1.4e-13 79.7 81 60.5
Sopen07g023750 Solanum pennellii HOM05D006736 ORTHO05D008459 4.1e-13 78.2 77 59.7
SGA_v2.0_scaffold73G24482 Striga asiatica HOM05D002257 ORTHO05D002417 1.6e-12 76.3 84 51.2
SGA_v2.0_scaffold49G18393 Striga asiatica HOM05D006736 ORTHO05D008459 2.7e-12 75.5 79 54.4
GSVIVG01014741001 Vitis vinifera HOM05D006736 ORTHO05D008459 1.5e-10 69.7 98 40.8
DCAR_008749 Daucus carota HOM05D006736 ORTHO05D008459 1.9e-10 69.3 81 50.6
Solyc07g045200.1 Solanum lycopersicum HOM05D006736 ORTHO05D008459 2.5e-10 68.9 59 64.4
Aqoxy4G01886 Aquilegia oxysepala HOM05D006736 ORTHO05D008459 5.6e-10 67.8 107 46.7
Glyma.14G011700 Glycine max HOM05D006736 ORTHO05D008459 3.6e-09 65.1 90 38.9
Lsat_1_v5_gn_5_122340 Lactuca sativa HOM05D006736 ORTHO05D008459 4.7e-09 64.7 52 69.2
Cfa021889 Carpinus fangiana HOM05D006736 ORTHO05D008459 8.0e-09 63.9 77 53.2
Haze_09864 Corylus avellana HOM05D004577 ORTHO05D005062 8.0e-09 63.9 76 51.3
Duzib170G0862 Durio zibethinus HOM05D006736 ORTHO05D008459 8.0e-09 63.9 82 50.0
Duzib268G0079 Durio zibethinus HOM05D006736 ORTHO05D008459 1.1e-08 63.5 83 49.4
ECA234G2793 Erigeron canadensis HOM05D006736 ORTHO05D008459 1.8e-08 62.8 62 58.1
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 3.1e-08 62.0 80 46.2
Manes.05G200400 Manihot esculenta HOM05D006736 ORTHO05D008459 3.1e-08 62.0 88 46.6
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 4.0e-08 61.6 71 53.5
Nitab4.5_0001229g0080 Nicotiana tabacum HOM05D006736 ORTHO05D008459 5.2e-08 61.2 53 62.3
LjContig00081g0022969 Lotus japonicus HOM05D006736 ORTHO05D008459 6.8e-08 60.8 78 44.9
Sc03g0011540 Simmondsia chinensis HOM05D006736 ORTHO05D008459 1.2e-07 60.1 79 48.1
ClCG09G021530 Citrullus lanatus HOM05D006736 ORTHO05D008459 1.5e-07 59.7 80 50.0
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 2.0e-07 59.3 56 58.9
Eucgr.F02027 Eucalyptus grandis HOM05D006736 ORTHO05D008459 2.6e-07 58.9 83 48.2
Lalb_Chr20g0114121 Lupinus albus HOM05D006736 ORTHO05D008459 2.6e-07 58.9 75 46.7
MELO3C024968.2 Cucumis melo HOM05D006736 ORTHO05D008459 5.8e-07 57.8 58 56.9
Gohir.A13G130900 Gossypium hirsutum HOM05D006736 ORTHO05D008459 5.8e-07 57.8 47 66.0
COL.COLO4_07740 Corchorus olitorius HOM05D006736 ORTHO05D008459 7.5e-07 57.4 91 46.2
Medtr3g461010 Medicago truncatula HOM05D006736 ORTHO05D008459 7.5e-07 57.4 76 47.4
Psat5g166560 Pisum sativum HOM05D006736 ORTHO05D008459 7.5e-07 57.4 96 40.6
EL10Ac4g07540 Beta vulgaris HOM05D006736 ORTHO05D008459 9.8e-07 57.0 69 50.7
MBI14_g39127_MAGBIO Magnolia biondii HOM05D006736 ORTHO05D008459 1.3e-06 56.6 86 45.3
Manes.01G003400 Manihot esculenta HOM05D006736 ORTHO05D008459 1.3e-06 56.6 79 48.1
Prupe.6G028200 Prunus persica HOM05D006736 ORTHO05D008459 1.3e-06 56.6 90 41.1
Sed0023265 Sechium edule HOM05D006736 ORTHO05D008459 1.3e-06 56.6 79 45.6
Cpa.g.sc12.109 Carica papaya HOM05D006736 ORTHO05D008459 1.7e-06 56.2 71 47.9
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 1.7e-06 56.2 72 48.6
ClCG10G003900 Citrullus lanatus HOM05D006736 ORTHO05D008459 2.2e-06 55.8 81 43.2
ClCG10G004060 Citrullus lanatus HOM05D006736 ORTHO05D008459 2.2e-06 55.8 81 43.2
Gohir.D13G134200 Gossypium hirsutum HOM05D006736 ORTHO05D008459 2.2e-06 55.8 47 63.8
Gorai.013G150500 Gossypium raimondii HOM05D006736 ORTHO05D008459 2.2e-06 55.8 47 63.8
Ah.06g181490 Amaranthus hybridus HOM05D006736 ORTHO05D008459 2.9e-06 55.5 87 48.3
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 2.9e-06 55.5 73 45.2
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 2.9e-06 55.5 72 44.4
Phvul.008G281200 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 3.7e-06 55.1 76 39.5
Sabra11G0088600 Salix brachista HOM05D006736 ORTHO05D008459 3.7e-06 55.1 72 47.2
Thecc.07G008000 Theobroma cacao HOM05D006736 ORTHO05D008459 3.7e-06 55.1 85 45.9
MELO3C014070.2 Cucumis melo HOM05D006736 ORTHO05D008459 4.9e-06 54.7 55 52.7
Lalb_Chr15g0082301 Lupinus albus HOM05D006736 ORTHO05D008459 4.9e-06 54.7 104 39.4
QL08p003180 Quercus lobata HOM05D006736 ORTHO05D008459 4.9e-06 54.7 77 45.5
Gohir.D01G078200 Gossypium hirsutum HOM05D006736 ORTHO05D008459 6.4e-06 54.3 78 41.0
Gorai.002G102800 Gossypium raimondii HOM05D006736 ORTHO05D008459 6.4e-06 54.3 78 41.0
Phvul.006G059230 Phaseolus vulgaris HOM05D006736 ORTHO05D008459 6.4e-06 54.3 72 44.4
TWI39G1297 Tripterygium wilfordii HOM05D006736 ORTHO05D008459 6.4e-06 54.3 53 56.6
ATR0751G116 Amborella trichopoda HOM05D006736 ORTHO05D008459 8.3e-06 53.9 69 46.4
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 8.3e-06 53.9 33 69.7
CsaV3_3G003890 Cucumis sativus L. HOM05D006736 ORTHO05D008459 8.3e-06 53.9 63 54.0


User provided reference genes

Program Settings