Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.1e-195 686.4 354 100.0
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 2.9e-175 618.6 354 89.3
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 3.2e-174 615.1 354 87.9
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 9.5e-166 587.0 354 84.7
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 3.0e-164 582.0 351 84.0
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.1e-161 573.5 354 82.8
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 1.6e-160 569.7 355 81.4
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 2.7e-160 568.9 346 83.2
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 2.7e-160 568.9 336 86.0
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 3.0e-159 565.5 350 82.0
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 1.1e-158 563.5 353 82.2
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 1.9e-158 562.8 350 82.0
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 5.6e-158 561.2 353 82.2
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 7.3e-158 560.8 335 84.8
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 1.2e-157 560.1 348 81.6
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 1.6e-157 559.7 350 81.4
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.1e-157 559.3 340 83.5
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 2.8e-157 558.9 356 81.2
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 2.8e-157 558.9 356 81.2
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 3.6e-157 558.5 350 81.1
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 8.0e-157 557.4 356 80.6
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 8.0e-157 557.4 354 80.5
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 1.1e-156 557.0 350 81.4
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 1.8e-156 556.2 335 84.2
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 4.0e-156 555.1 335 84.2
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 4.0e-156 555.1 354 80.2
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 3.4e-155 552.0 335 83.3
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 5.8e-155 551.2 340 82.4
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 7.5e-155 550.8 352 79.5
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.3e-154 550.1 356 79.5
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 1.3e-154 550.1 341 82.7
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 1.3e-154 550.1 340 81.2
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 1.3e-154 550.1 348 81.3
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.7e-154 549.7 354 80.2
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 3.7e-154 548.5 335 83.9
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 2.4e-153 545.8 355 79.2
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.2e-153 545.4 361 77.8
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 5.4e-153 544.7 336 82.7
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.2e-152 543.5 355 80.3
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 1.6e-152 543.1 354 79.1
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 2.0e-152 542.7 355 80.0
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 2.7e-152 542.3 330 83.9
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 3.5e-152 542.0 361 77.3
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 3.5e-152 542.0 362 77.6
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 4.6e-152 541.6 362 79.0
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 4.6e-152 541.6 341 81.5
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 6.0e-152 541.2 321 85.7
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 1.3e-151 540.0 315 86.0
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 3.9e-151 538.5 415 70.1
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 6.6e-151 537.7 369 75.6
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 6.6e-151 537.7 379 73.9
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 1.1e-150 537.0 325 83.1
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 1.9e-150 536.2 353 79.3
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 3.3e-150 535.4 330 82.4
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 4.3e-150 535.0 352 79.0
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 5.6e-150 534.6 351 79.2
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 5.6e-150 534.6 351 79.5
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 6.2e-149 531.2 336 79.2
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 1.1e-148 530.4 356 78.4
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 3.1e-148 528.9 338 79.3
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 4.0e-148 528.5 362 77.3
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 5.2e-148 528.1 352 78.1
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 5.2e-148 528.1 318 84.0
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.2e-147 526.9 336 78.6
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 2.6e-147 525.8 335 78.8
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 4.4e-147 525.0 354 78.0
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 4.4e-147 525.0 353 77.9
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 4.4e-147 525.0 354 78.0
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 5.8e-147 524.6 331 81.9
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 9.9e-147 523.9 354 77.7
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 2.9e-146 522.3 354 77.4
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 7.1e-145 517.7 317 82.3
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 3.9e-143 511.9 344 78.2
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 1.9e-142 509.6 311 81.7
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 2.1e-141 506.1 311 82.6
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 2.1e-141 506.1 356 74.7
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 1.1e-140 503.8 311 81.7
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 4.0e-140 501.9 307 82.1
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 2.2e-138 496.1 318 80.2
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 8.4e-138 494.2 354 74.0
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 2.4e-137 492.7 308 82.5
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 3.5e-136 488.8 318 76.1
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 7.8e-136 487.6 330 76.4
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 5.1e-135 485.0 313 78.0
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 1.5e-134 483.4 352 70.5
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 7.3e-134 481.1 287 85.0
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 9.6e-134 480.7 389 68.1
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 1.8e-132 476.5 354 73.4
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.5e-131 473.4 406 64.0
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 5.8e-131 471.5 303 78.5
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 2.2e-130 469.5 314 74.2
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 8.4e-130 467.6 307 78.5
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 2.7e-128 462.6 314 75.8
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 4.6e-128 461.8 296 78.7
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 3.6e-125 452.2 347 70.3
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 8.1e-125 451.1 345 70.4
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 1.3e-119 433.7 314 70.1
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 6.7e-119 431.4 335 68.7
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 4.3e-118 428.7 344 67.7
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 8.4e-114 414.5 302 66.9
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.6e-112 410.2 242 87.2
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 6.7e-111 404.8 344 62.2
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 1.1e-108 397.5 255 77.6
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 1.8e-103 380.2 221 86.4
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.4e-97 360.5 217 82.0
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 3.6e-88 329.3 303 57.4
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 1.7e-85 320.5 230 69.1
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 1.5e-83 313.9 308 55.8
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 1.0e-82 311.2 313 52.7
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 2.9e-82 309.7 187 82.4
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 2.5e-81 306.6 192 81.8
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 1.6e-75 287.3 220 68.2
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 4.5e-75 285.8 167 88.0
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 5.9e-75 285.4 212 68.4
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 8.8e-71 271.6 353 48.4
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 5.9e-67 258.8 151 85.4
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 3.1e-60 236.5 286 48.3
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 2.8e-56 223.4 160 70.6
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 1.6e-48 197.6 161 65.2
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 2.0e-46 190.7 242 51.7
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.0e-42 178.3 265 44.9
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 5.6e-41 172.6 144 61.1
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 9.5e-41 171.8 123 67.5
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.6e-38 163.7 280 35.7
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 4.4e-38 162.9 263 40.3
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 3.7e-37 159.8 110 66.4
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 2.7e-35 153.7 243 44.0
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 3.4e-30 136.7 85 74.1
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 7.5e-30 135.6 101 72.3
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 3.2e-28 130.2 81 80.2
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 3.9e-26 123.2 108 63.9
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 1.4e-23 114.8 74 73.0
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.1e-20 105.1 113 52.2
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 2.7e-19 100.5 70 74.3
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 3.9e-18 96.7 88 62.5
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.9e-18 96.7 59 86.4
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 3.3e-17 93.6 54 75.9
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.4e-15 88.2 62 71.0
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 4.4e-14 83.2 55 69.1
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 4.2e-12 76.6 43 83.7
DCAR_023607 Daucus carota HOM05D005313 ORTHO05D006317 8.7e-10 68.9 61 60.7
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 3.3e-09 67.0 58 58.6
Oeu045873.1 Olea europaea HOM05D005313 ORTHO05D006317 2.4e-07 60.8 34 82.4


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