Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.7e-58 227.3 106 100.0
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 6.3e-49 197.2 106 86.8
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 8.3e-49 196.8 113 85.0
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 5.4e-48 194.1 106 84.9
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 7.7e-47 190.3 106 82.1
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.7e-46 189.1 105 83.8
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 5.0e-46 187.6 106 81.1
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 2.5e-45 185.3 101 84.2
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 2.5e-45 185.3 107 81.3
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 1.2e-44 183.0 106 81.1
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.2e-44 183.0 106 78.3
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 2.8e-44 181.8 109 76.1
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 3.6e-44 181.4 105 77.1
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 8.0e-44 180.3 105 77.1
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 8.0e-44 180.3 94 84.0
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.3e-43 178.7 106 77.4
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 4.0e-43 177.9 107 76.6
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 6.8e-43 177.2 105 75.2
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.2e-42 176.4 103 80.6
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 3.4e-42 174.9 106 76.4
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 3.4e-42 174.9 105 73.3
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 4.4e-42 174.5 106 75.5
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 5.7e-42 174.1 104 77.9
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 9.8e-42 173.3 107 73.8
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 1.3e-41 172.9 106 76.4
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.3e-41 172.9 126 67.5
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 1.7e-41 172.6 113 71.7
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 4.9e-41 171.0 113 68.1
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 4.9e-41 171.0 108 73.1
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 8.3e-41 170.2 106 72.6
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.1e-40 169.9 103 72.8
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.8e-40 169.1 106 74.5
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.4e-40 168.7 106 74.5
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.4e-40 168.7 100 77.0
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 2.4e-40 168.7 102 75.5
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.1e-40 167.9 104 77.9
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 2.0e-39 165.6 94 79.8
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 2.7e-39 165.2 107 71.0
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 4.5e-39 164.5 107 71.0
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 4.5e-39 164.5 104 76.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.9e-39 164.1 107 72.9
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 7.8e-39 163.7 106 71.7
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.0e-38 163.3 105 72.4
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 1.7e-38 162.5 106 67.9
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.7e-38 162.5 104 76.9
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 3.8e-38 161.4 108 68.5
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.9e-37 159.1 107 70.1
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.3e-37 157.9 102 70.6
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 4.3e-37 157.9 102 70.6
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 5.6e-37 157.5 94 74.5
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 9.5e-37 156.8 96 71.9
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.6e-36 156.0 103 70.9
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 2.1e-36 155.6 103 68.9
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 3.6e-36 154.8 103 65.0
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 3.6e-36 154.8 102 69.6
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.7e-36 154.5 100 68.0
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 6.1e-36 154.1 102 69.6
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.3e-35 152.1 105 66.7
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.3e-35 152.1 101 67.3
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.0e-35 151.8 102 68.6
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 8.9e-35 150.2 99 67.7
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.9e-35 150.2 102 67.6
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 8.9e-35 150.2 104 67.3
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 8.9e-35 150.2 108 63.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 5.7e-34 147.5 108 64.8
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 9.8e-34 146.7 101 63.4
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.7e-33 146.0 108 63.9
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.7e-33 146.0 108 62.0
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.2e-33 145.6 103 65.0
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.9e-33 145.2 70 94.3
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.1e-32 143.3 105 62.9
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-32 142.9 102 65.7
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.8e-32 142.5 106 64.2
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.1e-32 141.4 75 84.0
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 4.1e-32 141.4 160 46.2
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 5.4e-32 141.0 105 60.0
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 5.4e-32 141.0 79 79.7
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 9.2e-32 140.2 75 84.0
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 9.2e-32 140.2 105 61.0
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 2.0e-31 139.0 105 59.0
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 4.6e-31 137.9 78 82.1
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 5.9e-31 137.5 105 62.9
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 5.9e-31 137.5 100 65.0
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 5.9e-31 137.5 100 58.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.3e-30 136.3 100 60.0
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.3e-30 136.3 100 60.0
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.7e-30 136.0 105 60.0
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.7e-30 136.0 89 67.4
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.9e-30 134.8 105 57.1
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 5.0e-30 134.4 105 59.0
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 6.6e-30 134.0 105 57.1
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.5e-29 132.9 74 81.1
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 2.5e-29 132.1 124 52.4
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 5.6e-29 131.0 77 75.3
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 7.3e-29 130.6 90 60.0
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 8.0e-28 127.1 78 71.8
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.0e-27 126.7 78 71.8
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.0e-27 126.7 73 82.2
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.4e-27 126.3 120 52.5
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.4e-27 126.3 97 58.8
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.8e-27 125.9 78 71.8
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.8e-27 125.9 133 48.1
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 3.1e-27 125.2 122 50.8
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 3.1e-27 125.2 122 50.8
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 3.1e-27 125.2 127 48.0
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 6.8e-27 124.0 118 53.4
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 6.8e-27 124.0 78 71.8
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 6.8e-27 124.0 75 74.7
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 8.9e-27 123.6 100 55.0
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.5e-26 122.9 122 48.4
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 7.5e-26 120.6 91 56.0
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 2.2e-25 119.0 78 66.7
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.2e-25 119.0 70 72.9
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 7.0e-24 114.0 73 68.5
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.0e-23 112.5 90 51.1
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 1.3e-22 109.8 69 69.6
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.3e-22 109.0 55 83.6
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.1e-19 100.1 74 63.5
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 5.8e-18 94.4 122 42.6
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 5.8e-18 94.4 78 59.0
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.3e-17 93.2 77 55.8
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.9e-16 89.4 50 74.0
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 4.1e-16 88.2 104 37.5
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 4.7e-12 74.7 40 80.0
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 4.7e-12 74.7 96 35.4
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 6.2e-12 74.3 40 80.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 1.4e-11 73.2 50 64.0
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 9.2e-08 60.5 52 53.8
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 3.0e-06 55.5 61 45.9


User provided reference genes

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