Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.8e-82 307.8 152 100.0
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.0e-81 303.5 152 98.7
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.9e-79 297.7 152 98.0
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.1e-57 226.9 196 66.8
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.5e-47 191.0 100 94.0
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.7e-31 139.8 69 97.1
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 6.1e-29 131.3 69 88.4
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 4.8e-26 121.7 70 85.7
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 4.1e-25 118.6 70 81.4
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 7.0e-25 117.9 90 70.0
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.2e-24 117.1 67 80.6
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 4.5e-24 115.2 67 82.1
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 4.5e-24 115.2 67 82.1
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 4.5e-24 115.2 67 82.1
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 4.5e-24 115.2 67 82.1
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.5e-24 115.2 77 75.3
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.0e-23 114.0 70 78.6
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.0e-23 114.0 90 65.6
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.3e-23 113.6 70 75.7
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.2e-23 112.8 68 83.8
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 5.0e-23 111.7 70 78.6
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 5.0e-23 111.7 68 79.4
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 8.5e-23 110.9 70 77.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.1e-22 110.5 69 76.8
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.1e-22 110.5 67 80.6
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.1e-22 110.5 67 80.6
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.1e-22 110.5 67 76.1
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.9e-22 109.8 70 75.7
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.9e-22 109.8 70 78.6
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 2.5e-22 109.4 110 52.7
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 3.2e-22 109.0 90 64.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.2e-22 108.6 64 81.2
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 4.2e-22 108.6 68 76.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 4.2e-22 108.6 68 76.5
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.2e-22 108.6 68 76.5
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.2e-22 108.6 68 76.5
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 5.5e-22 108.2 68 75.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 5.5e-22 108.2 67 77.6
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 7.2e-22 107.8 91 62.6
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 7.2e-22 107.8 70 75.7
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 9.5e-22 107.5 69 73.9
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 9.5e-22 107.5 68 73.5
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.2e-21 107.1 67 76.1
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.2e-21 107.1 95 61.1
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.2e-21 107.1 100 61.0
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.6e-21 106.7 68 75.0
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.1e-21 106.3 69 75.4
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.1e-21 106.3 69 75.4
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 2.1e-21 106.3 68 75.0
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.1e-21 106.3 75 73.3
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.8e-21 105.9 68 72.1
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.8e-21 105.9 68 72.1
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.8e-21 105.9 67 74.6
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 3.6e-21 105.5 63 81.0
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.4e-20 103.6 66 74.2
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.4e-20 103.6 68 73.5
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.4e-20 103.6 90 61.1
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.4e-20 103.6 68 72.1
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.8e-20 103.2 67 74.6
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 3.0e-20 102.4 68 70.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 4.0e-20 102.1 70 72.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 6.8e-20 101.3 67 73.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 6.8e-20 101.3 68 69.1
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 8.8e-20 100.9 90 56.7
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.2e-19 100.5 67 71.6
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.2e-19 100.5 67 71.6
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.5e-19 100.1 68 69.1
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.6e-19 99.4 67 73.1
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 9.8e-19 97.4 67 71.6
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.7e-18 96.7 65 69.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.7e-18 96.7 67 71.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 4.9e-18 95.1 68 69.1
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.4e-17 93.6 68 70.6
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 3.1e-17 92.4 68 70.6
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.0e-16 89.7 64 70.3
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 4.5e-16 88.6 83 56.6
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.3e-15 86.3 63 65.1
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.3e-14 82.0 65 60.0
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.2e-13 80.5 64 62.5
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 2.0e-11 73.2 40 77.5
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.7e-10 68.9 74 50.0
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 3.2e-09 65.9 64 56.2
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 7.3e-06 54.7 65 49.2


User provided reference genes

Program Settings