Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048741 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 7.6e-52 206.8 101 100.0
CSS0033904 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 2.8e-46 188.3 101 92.1
CSS0008993 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 6.9e-45 183.7 101 89.1
CSS0007190 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 7.6e-44 180.3 101 89.1
CSS0038232 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 7.9e-41 170.2 96 86.5
CSS0044750 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 7.9e-41 170.2 96 86.5
CSS0046742 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D022135 1.0e-35 153.3 101 79.2
Dinv34774 Davidia involucrata HOM05D000690 ORTHO05D001022 1.0e-19 100.1 101 58.4
Dinv32913 Davidia involucrata HOM05D000690 ORTHO05D001022 7.2e-18 94.0 106 54.7
Actinidia24907 Actinidia chinensis HOM05D000690 ORTHO05D001022 5.7e-15 84.3 99 53.5
Rhsim01G0273400 Rhododendron simsii HOM05D000690 ORTHO05D001022 5.7e-15 84.3 113 47.8
TAR365G1196 Trochodendron aralioides HOM05D000690 ORTHO05D001022 3.7e-14 81.6 92 50.0
QL12p021077 Quercus lobata HOM05D000690 ORTHO05D001022 2.4e-13 79.0 106 50.0
Hma1.2p1_0667F.1_g199720 Hydrangea macrophylla HOM05D000690 ORTHO05D001022 5.3e-13 77.8 101 48.5
Duzib138G1276 Durio zibethinus HOM05D000690 ORTHO05D001022 7.7e-12 73.9 107 48.6
CiPaw.07G089900 Carya illinoinensis HOM05D000690 ORTHO05D001022 1.0e-11 73.6 106 48.1
Nn6g34094 Nelumbo nucifera HOM05D000690 ORTHO05D001022 1.0e-11 73.6 103 43.7
Prupe.8G238300 Prunus persica HOM05D000690 ORTHO05D001022 1.3e-11 73.2 105 46.7
Actinidia00779 Actinidia chinensis HOM05D000690 ORTHO05D001022 1.7e-11 72.8 83 51.8
Thecc.01G275400 Theobroma cacao HOM05D000690 ORTHO05D001022 2.2e-11 72.4 108 47.2
Duzib211G0670 Durio zibethinus HOM05D000690 ORTHO05D001022 3.8e-11 71.6 107 47.7
GSVIVG01001173001 Vitis vinifera HOM05D000690 ORTHO05D001022 5.0e-11 71.2 104 45.2
Cfa006164 Carpinus fangiana HOM05D000690 ORTHO05D001022 6.5e-11 70.9 103 44.7
RcHm_v2.0_Chr6g0290641 Rosa chinensis HOM05D000690 ORTHO05D001022 1.1e-10 70.1 108 48.1
Haze_04686 Corylus avellana HOM05D000690 ORTHO05D001022 1.5e-10 69.7 104 46.2
MSTRG.21547 Avicennia marina HOM05D000690 ORTHO05D001022 1.9e-10 69.3 103 44.7
CiPaw.08G107400 Carya illinoinensis HOM05D000690 ORTHO05D001022 1.9e-10 69.3 106 44.3
Nn1g06216 Nelumbo nucifera HOM05D000690 ORTHO05D001022 4.2e-10 68.2 103 43.7
TAR633G0554 Trochodendron aralioides HOM05D000690 ORTHO05D001022 4.2e-10 68.2 92 42.4
Gorai.007G138400 Gossypium raimondii HOM05D000690 ORTHO05D001022 1.2e-09 66.6 107 46.7
Nn1g02358 Nelumbo nucifera HOM05D000690 ORTHO05D001022 1.2e-09 66.6 103 42.7
Gohir.D11G129400 Gossypium hirsutum HOM05D000690 ORTHO05D001022 1.6e-09 66.2 107 46.7
TAR362G0245 Trochodendron aralioides HOM05D000690 ORTHO05D001022 2.1e-09 65.9 103 42.7
Lju41C26G6 Lonicera japonica HOM05D000690 ORTHO05D001022 2.7e-09 65.5 92 46.7
Sabra05G0161600 Salix brachista HOM05D000690 ORTHO05D001022 3.6e-09 65.1 105 40.0
Dinv14007 Davidia involucrata HOM05D000690 ORTHO05D001022 1.0e-08 63.5 96 39.6
Duzib133G1531 Durio zibethinus HOM05D000690 ORTHO05D001022 1.0e-08 63.5 110 42.7
FvH4_2g23270 Fragaria vesca HOM05D000690 ORTHO05D001022 1.4e-08 63.2 108 46.3
Gohir.A11G124200 Gossypium hirsutum HOM05D000690 ORTHO05D001022 1.4e-08 63.2 107 44.9
Sabra02G0041500 Salix brachista HOM05D000690 ORTHO05D001022 1.4e-08 63.2 105 41.9
FAN27G0350 Fragaria x ananassa HOM05D000690 ORTHO05D001022 2.3e-08 62.4 109 45.9
Hund27938 Selenicereus undatus HOM05D000690 ORTHO05D001022 2.3e-08 62.4 108 41.7
FAN15G2082 Fragaria x ananassa HOM05D000690 ORTHO05D001022 3.0e-08 62.0 108 46.3
FAN20G1467 Fragaria x ananassa HOM05D000690 ORTHO05D001022 3.0e-08 62.0 108 45.4
Hund02827 Selenicereus undatus HOM05D000690 ORTHO05D001022 4.0e-08 61.6 108 40.7
CSS0047845 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D001022 5.2e-08 61.2 57 63.2
Manes.01G206000 Manihot esculenta HOM05D000690 ORTHO05D001022 5.2e-08 61.2 105 40.0
FAN24G1198 Fragaria x ananassa HOM05D000690 ORTHO05D001022 6.7e-08 60.8 108 45.4
Potri.002G050800 Populus trichocarpa HOM05D000690 ORTHO05D001022 8.8e-08 60.5 106 41.5
MSTRG.18247 Avicennia marina HOM05D000690 ORTHO05D001022 1.1e-07 60.1 105 42.9
Cfa011182 Carpinus fangiana HOM05D000690 ORTHO05D001022 1.1e-07 60.1 102 42.2
MSTRG.17455 Avicennia marina HOM05D000690 ORTHO05D001022 1.5e-07 59.7 105 40.0
Haze_00880 Corylus avellana HOM05D000690 ORTHO05D001022 1.5e-07 59.7 102 42.2
PSO761G0687 Papaver somniferum HOM05D000690 ORTHO05D001022 2.6e-07 58.9 98 40.8
Rhsim02G0026200 Rhododendron simsii HOM05D000690 ORTHO05D001022 2.6e-07 58.9 93 41.9
Cpa.g.sc487.5 Carica papaya HOM05D000690 ORTHO05D001022 4.4e-07 58.2 103 43.7
CiPaw.01G167900 Carya illinoinensis HOM05D000690 ORTHO05D001022 1.7e-06 56.2 102 39.2
SalBow6G0182 Salvia bowleyana HOM05D000690 ORTHO05D001022 1.7e-06 56.2 80 47.5
COL.COLO4_09065 Corchorus olitorius HOM05D000690 ORTHO05D001022 2.2e-06 55.8 111 43.2
Manes.03G176900 Manihot esculenta HOM05D000690 ORTHO05D001022 2.2e-06 55.8 101 39.6
Potri.005G211500 Populus trichocarpa HOM05D000690 ORTHO05D001022 2.2e-06 55.8 105 35.2
PSO210G6390 Papaver somniferum HOM05D000690 ORTHO05D001022 3.7e-06 55.1 99 41.4
Hund09504 Selenicereus undatus HOM05D000690 ORTHO05D001022 4.8e-06 54.7 105 39.0
Gorai.012G060900 Gossypium raimondii HOM05D000690 ORTHO05D022135 6.3e-06 54.3 74 50.0
vmacro15352 Vaccinium macrocarpon HOM05D000690 ORTHO05D001022 6.3e-06 54.3 108 37.0


User provided reference genes

Program Settings