Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.4e-81 304.3 184 100.0
CSS0002487 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-78 296.2 184 96.2
CSS0012893 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-78 296.2 184 96.2
CSS0020953 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.7e-78 296.2 184 96.2
CSS0007177 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.5e-77 290.4 184 95.7
CSS0042621 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.2e-76 287.7 186 93.5
CSS0032614 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-74 282.3 184 91.3
CSS0038071 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.1e-52 207.6 185 73.5
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.3e-30 136.3 66 93.9
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.9e-30 135.6 106 65.1
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.1e-30 135.2 66 93.9
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-30 134.8 66 95.5
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-29 131.7 120 55.0
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-28 130.2 120 55.0
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-28 130.2 122 54.1
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-28 130.2 120 55.0
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.6e-28 130.2 122 54.1
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-28 129.4 122 54.1
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 122 54.1
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-28 129.0 122 54.1
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-28 128.6 127 52.8
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-28 128.6 127 52.8
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-28 128.6 127 52.8
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.3e-28 128.3 127 52.0
CSS0018539 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-27 127.5 120 53.3
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-27 127.5 127 52.0
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-27 127.1 127 52.0
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-27 127.1 127 52.0
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-27 127.1 127 52.0
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-27 127.1 127 52.0
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-27 127.1 127 52.0
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-27 127.1 127 52.0
CSS0001339 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-27 126.7 122 52.5
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-27 126.7 122 52.5
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-27 126.7 122 52.5
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.3e-27 125.2 120 52.5
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-23 113.2 136 44.1
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 2.3e-22 109.8 136 42.6
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.1e-21 107.5 136 42.6
Rhsim09G0006300 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.3e-21 105.5 126 43.7
Rhsim07G0133200 Rhododendron simsii HOM05D005012 ORTHO05D005886 4.8e-20 102.1 126 43.7
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 3.1e-19 99.4 132 42.4
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.1e-19 99.4 125 40.8
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 5.3e-19 98.6 126 44.4
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 2.0e-18 96.7 132 41.7
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.6e-18 96.3 128 43.0
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 1.3e-17 94.0 127 39.4
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.2e-17 93.2 129 40.3
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.2e-17 93.2 129 40.3
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.9e-17 92.8 129 40.3
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.8e-17 92.4 129 39.5
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.0e-17 92.0 129 39.5
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.0e-17 92.0 129 40.3
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 6.5e-17 91.7 129 39.5
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.5e-16 89.7 129 38.0
TWI77G0909 Tripterygium wilfordii HOM05D005012 ORTHO05D005886 7.2e-16 88.2 105 42.9
CSS0009064 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-15 87.4 124 45.2
FAN04G2098 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-15 86.3 128 36.7
FAN04G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-15 86.3 128 36.7
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-15 86.3 128 36.7
FAN15G1881 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-15 86.3 128 36.7
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.7e-15 86.3 128 36.7
FAN07G2178 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.9e-15 84.7 125 38.4
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.9e-15 84.7 129 38.0
Rhsim05G0112900 Rhododendron simsii HOM05D005012 ORTHO05D005886 8.8e-14 81.3 108 39.8
vmacro22380 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 4.4e-13 79.0 104 45.2
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.7e-13 78.6 123 35.0
CSS0034991 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.7e-13 77.8 109 39.4
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 2.8e-12 76.3 133 30.8
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 3.7e-12 75.9 79 50.6
vmacro03774 Vaccinium macrocarpon HOM05D005012 ORTHO05D005886 1.1e-11 74.3 107 39.3
FvH4_1g28940 Fragaria vesca HOM05D005012 ORTHO05D005886 3.5e-10 69.3 118 35.6
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 5.9e-10 68.6 118 34.7
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-09 67.8 54 57.4
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-09 67.4 54 55.6
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.3e-09 67.4 107 35.5
FAN26G2799 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.3e-09 67.4 107 38.3
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.7e-09 67.0 127 31.5
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.9e-09 66.2 126 31.7
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-09 64.7 54 55.6
Rhsim09G0115800 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.1e-08 64.3 44 63.6
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 1.5e-08 63.9 132 28.8
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-08 63.5 50 58.0
CSS0022576 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.5e-08 63.2 51 58.8
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.2e-08 61.6 127 27.6
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 9.4e-08 61.2 96 37.5
CSS0013518 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-07 60.8 50 58.0
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 1.2e-07 60.8 45 51.1
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-07 60.1 45 57.8
Rhsim07G0081300 Rhododendron simsii HOM05D000074 ORTHO05D002343 2.7e-07 59.7 58 50.0
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.6e-07 59.3 129 32.6
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.1e-07 58.5 128 28.1
Rhsim01G0081500 Rhododendron simsii HOM05D005012 ORTHO05D005886 6.1e-07 58.5 57 49.1
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.0e-07 58.2 132 31.1
FAN26G1690 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.0e-06 57.8 53 50.9
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-06 57.4 132 31.1
TAR626G0226 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.4e-06 57.4 103 35.0
Rhsim07G0167600 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.8e-06 57.0 55 41.8
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 4.0e-06 55.8 127 26.8
FvH4_6g21851 Fragaria vesca HOM05D005012 ORTHO05D005886 6.7e-06 55.1 46 52.2
Aqoxy3G01769 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 8.8e-06 54.7 129 27.9
CSS0018351 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.8e-06 54.7 50 58.0
CSS0028764 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.8e-06 54.7 145 31.7
CSS0036042 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.8e-06 54.7 37 62.2
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 8.8e-06 54.7 66 37.9
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 8.8e-06 54.7 120 30.0
vmacro14094 Vaccinium macrocarpon HOM05D000012 ORTHO05D000978 8.8e-06 54.7 63 42.9


User provided reference genes

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