Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 2.6e-65 251.9 126 100.0
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 5.6e-52 207.6 138 77.5
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 1.8e-50 202.6 138 76.8
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 9.8e-49 196.8 138 71.0
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 4.4e-41 171.4 141 68.8
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 4.9e-40 167.9 138 62.3
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 6.4e-40 167.5 138 60.9
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 8.3e-40 167.2 138 65.2
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 1.1e-39 166.8 138 58.7
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 9.2e-39 163.7 139 61.2
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 9.2e-39 163.7 139 61.9
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 1.6e-38 162.9 139 64.0
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 3.5e-38 161.8 139 61.9
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 1.0e-37 160.2 139 64.0
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 1.3e-37 159.8 139 60.4
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 1.7e-37 159.5 139 61.2
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.3e-37 159.1 139 60.4
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 2.3e-37 159.1 138 56.5
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 3.9e-37 158.3 137 56.2
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 3.9e-37 158.3 138 62.3
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 6.6e-37 157.5 138 55.1
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 6.6e-37 157.5 137 56.9
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 6.6e-37 157.5 139 61.2
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 8.6e-37 157.1 138 60.9
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 1.1e-36 156.8 139 59.7
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 1.1e-36 156.8 139 61.2
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 1.5e-36 156.4 138 56.5
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 1.9e-36 156.0 138 61.6
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 2.5e-36 155.6 138 55.8
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 3.3e-36 155.2 137 60.6
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 4.3e-36 154.8 139 59.7
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 9.5e-36 153.7 140 54.3
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 1.2e-35 153.3 139 60.4
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 1.6e-35 152.9 137 61.3
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 2.1e-35 152.5 139 60.4
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 2.1e-35 152.5 139 60.4
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 3.6e-35 151.8 137 59.1
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 3.6e-35 151.8 138 55.1
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 8.1e-35 150.6 138 58.0
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 2.3e-34 149.1 139 58.3
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 2.0e-33 146.0 137 59.1
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 5.8e-33 144.4 137 50.4
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.7e-32 142.9 138 52.9
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 1.7e-32 142.9 137 59.9
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.7e-32 142.9 137 49.6
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 2.2e-32 142.5 137 48.2
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 2.9e-32 142.1 137 51.1
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 2.9e-32 142.1 137 50.4
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 6.4e-32 141.0 137 58.4
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.1e-31 140.2 139 51.1
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 3.2e-31 138.7 138 57.2
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 3.2e-31 138.7 139 53.2
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 4.1e-31 138.3 137 46.7
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.2e-30 136.7 135 48.9
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.7e-30 135.6 137 51.8
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 3.5e-30 135.2 136 49.3
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 7.8e-30 134.0 137 50.4
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 1.7e-29 132.9 137 50.4
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.3e-29 132.5 123 54.5
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 5.1e-29 131.3 138 52.9
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 5.1e-29 131.3 138 55.8
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 6.6e-29 131.0 136 47.1
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 1.9e-28 129.4 138 52.2
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 1.9e-28 129.4 136 49.3
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.5e-28 129.0 138 51.4
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 3.3e-28 128.6 138 52.2
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 4.3e-28 128.3 137 51.8
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 4.3e-28 128.3 137 51.8
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 5.6e-28 127.9 137 47.4
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 5.6e-28 127.9 126 57.9
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 9.6e-28 127.1 136 47.8
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 9.6e-28 127.1 138 50.0
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 1.6e-27 126.3 136 47.8
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 2.1e-27 125.9 136 47.1
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 2.1e-27 125.9 137 51.8
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 2.8e-27 125.6 137 42.3
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.8e-27 125.6 137 48.9
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 3.6e-27 125.2 136 47.8
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 3.6e-27 125.2 136 47.8
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 6.2e-27 124.4 137 41.6
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 8.1e-27 124.0 138 50.0
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 5.2e-26 121.3 137 41.6
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 5.2e-26 121.3 137 47.4
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 5.2e-26 121.3 137 48.9
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 8.9e-26 120.6 137 48.9
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 2.0e-25 119.4 136 46.3
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 2.0e-25 119.4 139 46.8
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 4.4e-25 118.2 138 44.9
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 5.8e-25 117.9 138 49.3
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 7.6e-25 117.5 88 65.9
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 2.2e-24 115.9 137 45.3
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 3.8e-24 115.2 138 44.9
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 8.4e-24 114.0 136 44.9
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 8.4e-24 114.0 140 49.3
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 2.4e-23 112.5 138 45.7
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 2.4e-23 112.5 138 46.4
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 6.0e-22 107.8 139 42.4
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 3.3e-20 102.1 104 51.9
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 2.0e-17 92.8 112 51.8
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 8.4e-16 87.4 125 34.4
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 8.4e-16 87.4 132 35.6
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 2.1e-14 82.8 138 39.9
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 2.2e-08 62.8 71 50.7
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 4.9e-08 61.6 53 56.6


User provided reference genes

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