Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048681 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 6.0e-67 257.3 124 100.0
CSS0002377 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 3.0e-58 228.4 124 91.1
CSS0021917 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 5.8e-54 214.2 124 87.1
Rhsim12G0166600 Rhododendron simsii HOM05D007081 ORTHO05D008834 7.4e-41 170.6 101 80.2
vmacro16631 Vaccinium macrocarpon HOM05D007081 ORTHO05D008834 4.8e-40 167.9 101 77.2
CSS0035417 Camellia sinensis var. sinensis HOM05D007081 ORTHO05D008834 1.1e-36 156.8 84 91.7
Dinv38554 Davidia involucrata HOM05D007081 ORTHO05D008834 4.4e-33 144.8 89 76.4
DCAR_016469 Daucus carota HOM05D007081 ORTHO05D008834 1.2e-30 136.7 96 71.9
MD14G1175400 Malus domestica HOM05D007081 ORTHO05D008834 1.2e-30 136.7 103 64.1
QL10p008493 Quercus lobata HOM05D007081 ORTHO05D008834 1.6e-30 136.3 98 69.4
QL10p008625 Quercus lobata HOM05D007081 ORTHO05D008834 1.6e-30 136.3 98 69.4
Cfa019177 Carpinus fangiana HOM05D007081 ORTHO05D008834 2.6e-30 135.6 110 62.7
Haze_07555 Corylus avellana HOM05D007081 ORTHO05D008834 3.5e-30 135.2 110 62.7
Lj5A128T65 Lonicera japonica HOM05D007081 ORTHO05D008834 1.5e-28 129.8 132 55.3
GSVIVG01007682001 Vitis vinifera HOM05D007081 ORTHO05D008834 3.2e-28 128.6 100 64.0
CiPaw.11G022400 Carya illinoinensis HOM05D007081 ORTHO05D008834 7.2e-28 127.5 99 65.7
Thecc.03G023800 Theobroma cacao HOM05D007081 ORTHO05D008834 2.1e-27 125.9 104 61.5
TAR629G3400 Trochodendron aralioides HOM05D007081 ORTHO05D008834 4.7e-27 124.8 119 55.5
TWI39G1151 Tripterygium wilfordii HOM05D007081 ORTHO05D008834 1.1e-25 120.2 114 56.1
FvH4_5g05850 Fragaria vesca HOM05D007081 ORTHO05D008834 2.6e-25 119.0 93 64.5
FAN18G1088 Fragaria x ananassa HOM05D007081 ORTHO05D008834 2.6e-25 119.0 93 64.5
FAN08G1021 Fragaria x ananassa HOM05D007081 ORTHO05D008834 5.7e-25 117.9 60 90.0
Sc04g0001640 Simmondsia chinensis HOM05D007081 ORTHO05D008834 5.7e-25 117.9 93 65.6
RcHm_v2.0_Chr7g0192971 Rosa chinensis HOM05D007081 ORTHO05D008834 7.5e-25 117.5 93 62.4
CANSAT80G0092 Cannabis sativa HOM05D007081 ORTHO05D008834 1.7e-24 116.3 96 61.5
HanXRQChr04g0101311 Helianthus annuus HOM05D007081 ORTHO05D008834 2.2e-24 115.9 119 54.6
PGR044G1978 Punica granatum HOM05D007081 ORTHO05D008834 2.8e-24 115.5 100 56.0
Ciclev10023760m.g Citrus clementina HOM05D007081 ORTHO05D008834 3.7e-24 115.2 98 62.2
CAN.G338.9 Capsicum annuum HOM05D007081 ORTHO05D008834 4.8e-24 114.8 101 57.4
Glyma.04G186500 Glycine max HOM05D007081 ORTHO05D008834 4.8e-24 114.8 99 56.6
Gohir.D02G120200 Gossypium hirsutum HOM05D007081 ORTHO05D008834 6.3e-24 114.4 101 60.4
Gorai.005G133700 Gossypium raimondii HOM05D007081 ORTHO05D008834 6.3e-24 114.4 101 60.4
PGSC0003DMG400018175 Solanum tuberosum HOM05D007081 ORTHO05D008834 8.2e-24 114.0 103 57.3
Peaxi162Scf00089g01519 Petunia axillaris HOM05D007081 ORTHO05D008834 2.4e-23 112.5 66 77.3
Duzib205G1440 Durio zibethinus HOM05D007081 ORTHO05D008834 4.1e-23 111.7 61 82.0
Eucgr.K02814 Eucalyptus grandis HOM05D007081 ORTHO05D008834 4.1e-23 111.7 119 49.6
Nitab4.5_0001284g0100 Nicotiana tabacum HOM05D007081 ORTHO05D008834 4.1e-23 111.7 66 77.3
Solyc03g112510.2 Solanum lycopersicum HOM05D007081 ORTHO05D008834 7.0e-23 110.9 66 75.8
Sopen03g031570 Solanum pennellii HOM05D007081 ORTHO05D008834 7.0e-23 110.9 66 75.8
Cpa.g.sc35.77 Carica papaya HOM05D007081 ORTHO05D008834 9.1e-23 110.5 62 80.6
Migut.O00134 Erythranthe guttata HOM05D007081 ORTHO05D008834 9.1e-23 110.5 111 48.6
Ah.02g110780 Amaranthus hybridus HOM05D007081 ORTHO05D008834 2.0e-22 109.4 62 79.0
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea HOM05D007081 ORTHO05D008834 2.7e-22 109.0 100 57.0
Phvul.009G175500 Phaseolus vulgaris HOM05D007081 ORTHO05D008834 2.7e-22 109.0 93 58.1
MBI10_g32034_MAGBIO Magnolia biondii HOM05D007081 ORTHO05D008834 4.5e-22 108.2 59 86.4
Psat0s2597g0120 Pisum sativum HOM05D007081 ORTHO05D008834 4.5e-22 108.2 113 52.2
Lalb_Chr11g0070341 Lupinus albus HOM05D007081 ORTHO05D008834 7.7e-22 107.5 65 73.8
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea HOM05D007081 ORTHO05D008834 1.0e-21 107.1 99 55.6
Os01g0170100 Oryza sativa ssp. japonica HOM05D007081 ORTHO05D008834 1.3e-21 106.7 117 47.9
Sed0005220 Sechium edule HOM05D007081 ORTHO05D008834 1.3e-21 106.7 113 48.7
THA.LOC104809251 Tarenaya hassleriana HOM05D007081 ORTHO05D008834 1.3e-21 106.7 112 54.5
Manes.14G062600 Manihot esculenta HOM05D007081 ORTHO05D008834 2.2e-21 105.9 62 77.4
unitig_26.g9614 Utricularia gibba HOM05D007081 ORTHO05D008834 3.8e-21 105.1 69 66.7
Lj1g0004270 Lotus japonicus HOM05D007081 ORTHO05D008834 6.5e-21 104.4 95 55.8
Potri.002G197500 Populus trichocarpa HOM05D007081 ORTHO05D008834 6.5e-21 104.4 99 57.6
SGA_v2.0_scaffold90G27870 Striga asiatica HOM05D007081 ORTHO05D008834 8.5e-21 104.0 66 65.2
CDE06G1300 Ceratophyllum demersum HOM05D007081 ORTHO05D008834 1.1e-20 103.6 61 77.0
Lsat_1_v5_gn_1_28080 Lactuca sativa HOM05D007081 ORTHO05D008834 1.1e-20 103.6 66 72.7
Aqoxy3G02825 Aquilegia oxysepala HOM05D007081 ORTHO05D008834 1.5e-20 103.2 60 76.7
Carub.0007s0626 Capsella rubella HOM05D007081 ORTHO05D008834 1.5e-20 103.2 58 82.8
Ca_16151_v3 Cicer arietinum L. HOM05D007081 ORTHO05D008834 1.9e-20 102.8 97 53.6
Cc04_g12600 Coffea canephora HOM05D007081 ORTHO05D008834 3.2e-20 102.1 69 66.7
Sp7g31890 Schrenkiella parvula HOM05D007081 ORTHO05D008834 3.2e-20 102.1 58 79.3
ECA247G4072 Erigeron canadensis HOM05D007081 ORTHO05D008834 4.2e-20 101.7 65 70.8
Oeu040853.3 Olea europaea HOM05D007081 ORTHO05D008834 4.2e-20 101.7 92 53.3
PSO063G2349 Papaver somniferum HOM05D007081 ORTHO05D008834 4.2e-20 101.7 69 69.6
PSO832G3615 Papaver somniferum HOM05D007081 ORTHO05D008834 4.2e-20 101.7 69 69.6
Sabra02G0160000 Salix brachista HOM05D007081 ORTHO05D008834 5.5e-20 101.3 103 55.3
AUR62008170 Chenopodium quinoa HOM05D007081 ORTHO05D008834 1.2e-19 100.1 63 73.0
Medtr3g077300 Medicago truncatula HOM05D007081 ORTHO05D008834 1.2e-19 100.1 98 53.1
AT4G34140 Arabidopsis thaliana HOM05D007081 ORTHO05D008834 2.1e-19 99.4 60 76.7
AUR62028747 Chenopodium quinoa HOM05D007081 ORTHO05D008834 2.1e-19 99.4 63 71.4
AL7G17230 Arabidopsis lyrata HOM05D007081 ORTHO05D008834 3.6e-19 98.6 58 77.6
Hund02770 Selenicereus undatus HOM05D007081 ORTHO05D008834 4.7e-19 98.2 62 69.4
Thhalv10025133m.g Eutrema salsugineum HOM05D007081 ORTHO05D008834 6.1e-19 97.8 58 75.9
Zm00001eb122970 Zea mays HOM05D007081 ORTHO05D008834 6.1e-19 97.8 62 64.5
MELO3C026274.2 Cucumis melo HOM05D007081 ORTHO05D008834 1.0e-18 97.1 113 47.8
TPR.G31056 Trifolium pratense HOM05D007081 ORTHO05D008834 1.0e-18 97.1 99 52.5
CsaV3_1G001260 Cucumis sativus L. HOM05D007081 ORTHO05D008834 2.3e-18 95.9 110 48.2
A01p04290 Brassica napus HOM05D007081 ORTHO05D008834 4.0e-18 95.1 58 72.4
BraA01t00418Z Brassica rapa HOM05D007081 ORTHO05D008834 4.0e-18 95.1 58 72.4
ClCG06G017230 Citrullus lanatus HOM05D007081 ORTHO05D008834 4.0e-18 95.1 138 43.5
SEGI_13994 Sequoiadendron giganteum HOM05D007081 ORTHO05D008834 8.8e-18 94.0 58 70.7
ATR1152G054 Amborella trichopoda HOM05D007081 ORTHO05D008834 1.2e-17 93.6 61 73.8
HPP92_000312 Vanilla planifolia HOM05D007081 ORTHO05D008834 1.3e-16 90.1 64 65.6
C01p04690 Brassica napus HOM05D007081 ORTHO05D008834 2.2e-16 89.4 58 69.0
BolC1t00453H Brassica oleracea HOM05D007081 ORTHO05D008834 2.2e-16 89.4 58 69.0
Nitab4.5_0010304g0020 Nicotiana tabacum HOM05D007081 ORTHO05D008834 4.8e-16 88.2 66 63.6
EL10Ac5g10689 Beta vulgaris HOM05D007081 ORTHO05D008834 8.3e-16 87.4 97 48.5
Aa31LG2G16580 Aethionema arabicum HOM05D007081 ORTHO05D008834 1.1e-15 87.0 91 52.7
HPP92_000303 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.0e-14 82.8 53 73.6
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis HOM05D007081 ORTHO05D008834 2.2e-13 79.3 61 52.5
Glyma.06G179301 Glycine max HOM05D007081 ORTHO05D008834 6.5e-13 77.8 99 44.4
CBR_g4092 Chara braunii HOM05D007081 ORTHO05D000048 6.1e-11 71.2 92 42.4
CARHR242710 Cardamine hirsuta HOM05D007081 ORTHO05D008834 2.3e-10 69.3 35 88.6
Mapoly0102s0046 Marchantia polymorpha HOM05D007081 ORTHO05D008834 5.2e-10 68.2 61 49.2
Pp3c25_4990 Physcomitrium patens HOM05D007081 ORTHO05D008834 1.3e-08 63.5 53 52.8
HPP92_000296 Vanilla planifolia HOM05D007081 ORTHO05D008834 2.8e-08 62.4 56 51.8
Gohir.A03G091750 Gossypium hirsutum HOM05D007081 ORTHO05D008834 3.7e-08 62.0 34 82.4
SGA_v2.0_scaffold90G27873 Striga asiatica HOM05D007081 ORTHO05D008834 7.0e-07 57.8 44 54.5


User provided reference genes

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