Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0024627 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 2.5e-42 174.9 80 100.0
CSS0048666 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 2.5e-42 174.9 80 100.0
CSS0008401 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 5.8e-39 163.7 79 94.9
CSS0026527 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 1.7e-38 162.2 79 93.7
CSS0049470 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 8.4e-38 159.8 79 93.7
CSS0033490 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 3.2e-37 157.9 79 93.7
CSS0021031 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D007805 5.0e-22 107.5 73 72.6
CSS0034361 Camellia sinensis var. sinensis HOM05D004940 ORTHO05D018819 2.5e-21 105.1 51 96.1
Dinv16378 Davidia involucrata HOM05D004940 ORTHO05D007805 2.7e-20 101.7 73 68.5
Actinidia37536 Actinidia chinensis HOM05D004940 ORTHO05D007805 6.1e-20 100.5 73 68.5
Duzib138G0347 Durio zibethinus HOM05D004940 ORTHO05D007805 1.8e-19 99.0 73 64.4
vmacro02697 Vaccinium macrocarpon HOM05D004940 ORTHO05D007805 2.3e-19 98.6 73 63.0
Duzib133G0552 Durio zibethinus HOM05D004940 ORTHO05D007805 3.0e-19 98.2 51 84.3
TWI75G1829 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 5.1e-19 97.4 73 63.0
Lj1C71G15 Lonicera japonica HOM05D004940 ORTHO05D007805 6.7e-19 97.1 51 88.2
Lj1g0003710 Lotus japonicus HOM05D004940 ORTHO05D007805 6.7e-19 97.1 73 63.0
Rhsim13G0038600 Rhododendron simsii HOM05D004940 ORTHO05D007805 6.7e-19 97.1 51 82.4
COL.COLO4_36581 Corchorus olitorius HOM05D004940 ORTHO05D007805 8.8e-19 96.7 51 80.4
Glyma.19G166800 Glycine max HOM05D004940 ORTHO05D007805 8.8e-19 96.7 73 63.0
Thecc.01G253300 Theobroma cacao HOM05D004940 ORTHO05D007805 8.8e-19 96.7 51 82.4
TWI12G0664 Tripterygium wilfordii HOM05D004940 ORTHO05D007805 1.5e-18 95.9 73 63.0
Cc01_g18010 Coffea canephora HOM05D004940 ORTHO05D007805 2.0e-18 95.5 73 63.0
Lj1A78G31 Lonicera japonica HOM05D004940 ORTHO05D007805 2.0e-18 95.5 51 86.3
Lj1C79T2 Lonicera japonica HOM05D004940 ORTHO05D007805 2.0e-18 95.5 51 86.3
Prupe.8G218700 Prunus persica HOM05D004940 ORTHO05D007805 2.0e-18 95.5 73 63.0
MSTRG.18341 Avicennia marina HOM05D004940 ORTHO05D007805 2.6e-18 95.1 73 64.4
Psat3g055720 Pisum sativum HOM05D004940 ORTHO05D007805 2.6e-18 95.1 73 63.0
TAR362G0048 Trochodendron aralioides HOM05D004940 ORTHO05D007805 2.6e-18 95.1 73 60.3
Medtr7g098010 Medicago truncatula HOM05D004940 ORTHO05D007805 3.3e-18 94.7 73 63.0
Oeu028892.3 Olea europaea HOM05D004940 ORTHO05D007805 3.3e-18 94.7 73 65.8
SalBow4G0784 Salvia bowleyana HOM05D004940 ORTHO05D007805 3.3e-18 94.7 73 61.6
Manes.12G035200 Manihot esculenta HOM05D004940 ORTHO05D007805 4.4e-18 94.4 74 62.2
MD05G1192400 Malus domestica HOM05D004940 ORTHO05D007805 5.7e-18 94.0 73 61.6
Potri.014G195500 Populus trichocarpa HOM05D004940 ORTHO05D007805 5.7e-18 94.0 74 60.8
Aqoxy5G00176 Aquilegia oxysepala HOM05D004940 ORTHO05D007805 7.4e-18 93.6 51 78.4
Nn1g02898 Nelumbo nucifera HOM05D004940 ORTHO05D007805 7.4e-18 93.6 51 76.5
Phvul.001G163200 Phaseolus vulgaris HOM05D004940 ORTHO05D007805 7.4e-18 93.6 74 59.5
TPR.G9192 Trifolium pratense HOM05D004940 ORTHO05D007805 7.4e-18 93.6 73 61.6
arahy.Tifrunner.gnm1.ann1.N1VHSE Arachis hypogaea HOM05D004940 ORTHO05D007805 1.3e-17 92.8 73 60.3
arahy.Tifrunner.gnm1.ann1.YK26R7 Arachis hypogaea HOM05D004940 ORTHO05D007805 1.3e-17 92.8 73 60.3
PSO764G0099 Papaver somniferum HOM05D004940 ORTHO05D007805 1.3e-17 92.8 73 61.6
PSO832G3423 Papaver somniferum HOM05D004940 ORTHO05D007805 1.3e-17 92.8 73 61.6
Ciclev10019263m.g Citrus clementina HOM05D004940 ORTHO05D007805 1.7e-17 92.4 73 60.3
MBI07_g18994_MAGBIO Magnolia biondii HOM05D004940 ORTHO05D007805 2.2e-17 92.0 51 74.5
RcHm_v2.0_Chr6g0287291 Rosa chinensis HOM05D004940 ORTHO05D007805 2.2e-17 92.0 73 60.3
Gohir.A08G045700 Gossypium hirsutum HOM05D004940 ORTHO05D007805 2.8e-17 91.7 73 64.4
MD10G1178900 Malus domestica HOM05D004940 ORTHO05D007805 2.8e-17 91.7 73 60.3
Glyma.03G165500 Glycine max HOM05D004940 ORTHO05D007805 3.7e-17 91.3 73 60.3
Gohir.D08G056200 Gossypium hirsutum HOM05D004940 ORTHO05D007805 3.7e-17 91.3 73 64.4
Gorai.004G057300 Gossypium raimondii HOM05D004940 ORTHO05D007805 3.7e-17 91.3 73 64.4
HanXRQChr04g0111301 Helianthus annuus HOM05D004940 ORTHO05D007805 3.7e-17 91.3 51 80.4
GSVIVG01028386001 Vitis vinifera HOM05D004940 ORTHO05D007805 4.8e-17 90.9 73 58.9
Ca_08723_v3 Cicer arietinum L. HOM05D004940 ORTHO05D007805 6.3e-17 90.5 73 60.3
Lsat_1_v5_gn_8_92240 Lactuca sativa HOM05D004940 ORTHO05D007805 6.3e-17 90.5 73 61.6
QL09p040550 Quercus lobata HOM05D004940 ORTHO05D007805 6.3e-17 90.5 50 78.0
Migut.N02221 Erythranthe guttata HOM05D004940 ORTHO05D007805 8.2e-17 90.1 51 82.4
VMungo1383G2176 Vigna mungo HOM05D004940 ORTHO05D007805 8.2e-17 90.1 74 58.1
Sabra14G0144700 Salix brachista HOM05D004940 ORTHO05D007805 1.1e-16 89.7 74 59.5
ECA236G4817 Erigeron canadensis HOM05D004940 ORTHO05D007805 1.8e-16 89.0 73 60.3
Eucgr.A01366 Eucalyptus grandis HOM05D004940 ORTHO05D007805 1.8e-16 89.0 51 70.6
Sc24g0003690 Simmondsia chinensis HOM05D004940 ORTHO05D007805 1.8e-16 89.0 73 58.9
DCAR_018506 Daucus carota HOM05D004940 ORTHO05D007805 4.1e-16 87.8 73 58.9
Nitab4.5_0002389g0100 Nicotiana tabacum HOM05D004940 ORTHO05D007805 4.1e-16 87.8 73 58.9
Nitab4.5_0003295g0190 Nicotiana tabacum HOM05D004940 ORTHO05D007805 4.1e-16 87.8 73 58.9
Peaxi162Scf00415g00416 Petunia axillaris HOM05D004940 ORTHO05D007805 4.1e-16 87.8 73 60.3
Haze_24676 Corylus avellana HOM05D004940 ORTHO05D007805 5.3e-16 87.4 51 74.5
Migut.D00459 Erythranthe guttata HOM05D004940 ORTHO05D007805 7.0e-16 87.0 51 80.4
CsaV3_3G028180 Cucumis sativus L. HOM05D004940 ORTHO05D007805 9.1e-16 86.7 73 57.5
SHI09711 Sapria himalayana HOM05D004940 ORTHO05D018819 9.1e-16 86.7 73 57.5
CANSAT01G2138 Cannabis sativa HOM05D004940 ORTHO05D007805 1.6e-15 85.9 73 54.8
Cpa.g.sc165.41 Carica papaya HOM05D004940 ORTHO05D007805 2.0e-15 85.5 51 72.5
Hund05470 Selenicereus undatus HOM05D004940 ORTHO05D007805 2.0e-15 85.5 73 56.2
Solyc09g072710.4 Solanum lycopersicum HOM05D004940 ORTHO05D007805 2.0e-15 85.5 73 56.2
Sopen09g028520 Solanum pennellii HOM05D004940 ORTHO05D007805 2.0e-15 85.5 73 56.2
SGA_v2.0_scaffold1G00640 Striga asiatica HOM05D004940 ORTHO05D007805 2.0e-15 85.5 53 73.6
AUR62008763 Chenopodium quinoa HOM05D004940 ORTHO05D007805 2.6e-15 85.1 51 74.5
AUR62025474 Chenopodium quinoa HOM05D004940 ORTHO05D007805 2.6e-15 85.1 51 74.5
Manes.13G037500 Manihot esculenta HOM05D004940 ORTHO05D007805 2.6e-15 85.1 74 58.1
EL10Ac7g17647 Beta vulgaris HOM05D004940 ORTHO05D007805 3.5e-15 84.7 51 74.5
DCAR_000927 Daucus carota HOM05D004940 ORTHO05D007805 3.5e-15 84.7 73 60.3
CiPaw.03G268400 Carya illinoinensis HOM05D004940 ORTHO05D007805 4.5e-15 84.3 73 58.9
Thhalv10007051m.g Eutrema salsugineum HOM05D004940 ORTHO05D007805 4.5e-15 84.3 50 74.0
Atru.chr5.1783 Acer truncatum HOM05D004940 ORTHO05D007805 5.9e-15 84.0 73 57.5
Atru.chr5.1786 Acer truncatum HOM05D004940 ORTHO05D007805 5.9e-15 84.0 73 57.5
ClCG07G001250 Citrullus lanatus HOM05D004940 ORTHO05D007805 5.9e-15 84.0 73 54.8
PGR031G0691 Punica granatum HOM05D004940 ORTHO05D007805 5.9e-15 84.0 51 70.6
FAN15G2608 Fragaria x ananassa HOM05D004940 ORTHO05D007805 7.7e-15 83.6 73 56.2
FAN20G1599 Fragaria x ananassa HOM05D004940 ORTHO05D007805 7.7e-15 83.6 73 56.2
FAN27G1261 Fragaria x ananassa HOM05D004940 ORTHO05D007805 7.7e-15 83.6 73 56.2
Aa31LG1G20810 Aethionema arabicum HOM05D004940 ORTHO05D007805 1.0e-14 83.2 73 53.4
Lalb_Chr01g0019571 Lupinus albus HOM05D004940 ORTHO05D007805 1.0e-14 83.2 73 54.8
BcaC05g24475 Brassica carinata HOM05D004940 ORTHO05D007805 1.3e-14 82.8 50 70.0
A10p02520 Brassica napus HOM05D004940 ORTHO05D007805 1.3e-14 82.8 50 70.0
C05p02330 Brassica napus HOM05D004940 ORTHO05D007805 1.3e-14 82.8 50 70.0
BolC5t29011H Brassica oleracea HOM05D004940 ORTHO05D007805 1.3e-14 82.8 50 70.0
BraA10t42520Z Brassica rapa HOM05D004940 ORTHO05D007805 1.3e-14 82.8 50 70.0
Sed0008536 Sechium edule HOM05D004940 ORTHO05D007805 1.3e-14 82.8 73 54.8
CAN.G1270.3 Capsicum annuum HOM05D004940 ORTHO05D007805 2.9e-14 81.6 51 72.5
THA.LOC104826048 Tarenaya hassleriana HOM05D004940 ORTHO05D007805 2.9e-14 81.6 73 54.8
BcaC07g42217 Brassica carinata HOM05D004940 ORTHO05D007805 3.8e-14 81.3 50 70.0
Carub.0001s0317 Capsella rubella HOM05D004940 ORTHO05D007805 3.8e-14 81.3 50 70.0
CARHR003360 Cardamine hirsuta HOM05D004940 ORTHO05D007805 3.8e-14 81.3 50 70.0
AL1G13620 Arabidopsis lyrata HOM05D004940 ORTHO05D007805 5.0e-14 80.9 50 70.0
AT1G04010 Arabidopsis thaliana HOM05D004940 ORTHO05D007805 8.5e-14 80.1 50 68.0
Zm00001eb258680 Zea mays HOM05D004940 ORTHO05D007805 8.5e-14 80.1 73 50.7
Sp1g02850 Schrenkiella parvula HOM05D004940 ORTHO05D007805 1.1e-13 79.7 50 68.0
FAN24G3024 Fragaria x ananassa HOM05D004940 ORTHO05D007805 1.9e-13 79.0 73 54.8
A09p68080 Brassica napus HOM05D004940 ORTHO05D007805 3.2e-13 78.2 50 68.0
C08p52520 Brassica napus HOM05D004940 ORTHO05D007805 3.2e-13 78.2 50 68.0
BolC8t52779H Brassica oleracea HOM05D004940 ORTHO05D007805 3.2e-13 78.2 50 68.0
BraA09t42143Z Brassica rapa HOM05D004940 ORTHO05D007805 3.2e-13 78.2 50 68.0
ATR0736G200 Amborella trichopoda HOM05D004940 ORTHO05D007805 4.2e-13 77.8 51 68.6
FvH4_2g20890 Fragaria vesca HOM05D004940 ORTHO05D007805 1.6e-12 75.9 73 53.4
SEGI_08888 Sequoiadendron giganteum HOM05D004940 ORTHO05D007805 4.0e-11 71.2 51 60.8
Pp3c16_20320 Physcomitrium patens HOM05D004940 ORTHO05D007805 2.6e-10 68.6 49 63.3
AagrBONN_evm.TU.Sc2ySwM_344.1925 Anthoceros agrestis HOM05D004940 ORTHO05D007805 2.8e-09 65.1 50 60.0
SMO137G0189 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 8.2e-09 63.5 49 61.2
SMO137G0113 Selaginella moellendorffii HOM05D004940 ORTHO05D007805 9.1e-08 60.1 73 41.1
Mapoly0023s0070 Marchantia polymorpha HOM05D004940 ORTHO05D007805 5.9e-07 57.4 49 55.1


User provided reference genes

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