Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.8e-60 234.6 113 100.0
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 7.5e-32 140.6 102 70.6
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 9.8e-32 140.2 102 72.5
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 4.9e-31 137.9 102 67.6
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.4e-30 136.3 102 71.6
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 2.4e-30 135.6 102 69.6
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.7e-29 132.1 102 67.6
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 2.8e-26 122.1 104 62.5
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 8.0e-26 120.6 102 60.8
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 3.0e-25 118.6 102 63.7
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 3.0e-25 118.6 102 59.8
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 8.9e-25 117.1 102 61.8
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 3.4e-24 115.2 102 57.8
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 4.4e-24 114.8 102 58.8
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 9.8e-24 113.6 102 54.9
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 9.8e-24 113.6 104 58.7
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 1.3e-23 113.2 104 58.7
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.3e-23 113.2 102 58.8
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.3e-23 113.2 102 57.8
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 3.7e-23 111.7 102 58.8
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 4.9e-23 111.3 102 57.8
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 4.9e-23 111.3 102 57.8
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 4.9e-23 111.3 102 55.9
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 6.4e-23 110.9 102 56.9
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 6.4e-23 110.9 102 57.8
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 8.3e-23 110.5 102 55.9
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 8.3e-23 110.5 102 55.9
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 8.3e-23 110.5 102 53.9
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 8.3e-23 110.5 102 55.9
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.1e-22 110.2 102 52.9
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.8e-22 109.4 102 54.9
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.8e-22 109.4 102 52.9
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 2.4e-22 109.0 102 55.9
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 2.4e-22 109.0 102 52.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 2.4e-22 109.0 102 52.9
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.4e-22 109.0 102 52.9
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 3.2e-22 108.6 102 56.9
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.2e-22 108.6 104 53.8
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 3.2e-22 108.6 102 54.9
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 4.1e-22 108.2 102 53.9
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 4.1e-22 108.2 102 54.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 5.4e-22 107.8 102 52.9
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 5.4e-22 107.8 102 54.9
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 7.0e-22 107.5 102 52.9
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 9.2e-22 107.1 107 50.5
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 9.2e-22 107.1 104 53.8
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.2e-21 106.7 102 52.9
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.6e-21 106.3 102 52.9
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.0e-21 105.9 102 53.9
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 2.7e-21 105.5 102 52.0
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.5e-21 105.1 102 52.9
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 3.5e-21 105.1 102 52.9
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 4.6e-21 104.8 107 51.4
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 5.9e-21 104.4 102 51.0
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 7.8e-21 104.0 104 51.0
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 7.8e-21 104.0 102 50.0
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.0e-20 103.6 102 51.0
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 1.3e-20 103.2 102 53.9
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 1.7e-20 102.8 104 53.8
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 2.3e-20 102.4 113 52.2
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 2.3e-20 102.4 113 52.2
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 3.9e-20 101.7 102 52.0
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 3.9e-20 101.7 102 52.0
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 6.6e-20 100.9 104 53.8
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.9e-19 99.4 107 51.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.5e-19 99.0 102 49.0
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 4.3e-19 98.2 102 51.0
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 9.5e-19 97.1 102 50.0
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 9.5e-19 97.1 102 49.0
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.1e-18 95.9 94 55.3
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 2.8e-18 95.5 102 47.1
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.7e-18 94.7 54 85.2
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 6.2e-18 94.4 90 55.6
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 8.0e-18 94.0 101 46.5
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.1e-17 93.6 104 48.1
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 2.3e-17 92.4 107 49.5
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 4.0e-17 91.7 102 49.0
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 6.8e-17 90.9 104 50.0
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 1.7e-15 86.3 97 51.5
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.9e-15 85.5 102 47.1
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 1.1e-14 83.6 65 63.1
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.6e-13 79.7 54 68.5
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.0e-13 79.3 98 43.9
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.6e-13 78.2 54 72.2
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.3e-12 76.6 65 61.5
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.3e-12 76.6 65 56.9
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 3.0e-12 75.5 54 68.5
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 3.9e-12 75.1 102 41.2
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 8.6e-12 73.9 93 40.9
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 1.1e-11 73.6 92 42.4
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 5.6e-11 71.2 72 58.3
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.4e-09 66.6 46 71.7
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 5.8e-08 61.2 95 40.0
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 3.2e-06 55.5 110 36.4


User provided reference genes

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