Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 6.6e-93 344.0 168 100.0
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 1.3e-72 276.6 161 82.6
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.4e-66 255.8 155 76.1
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 2.7e-54 215.7 139 72.7
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 3.0e-53 212.2 152 67.1
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 3.0e-53 212.2 152 67.1
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.5e-52 209.1 149 68.5
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 9.7e-52 207.2 139 71.9
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 9.7e-52 207.2 139 71.9
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.3e-51 206.8 151 68.2
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.3e-51 206.8 149 68.5
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.2e-51 206.1 154 66.2
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 2.8e-51 205.7 211 52.6
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 6.3e-51 204.5 150 66.0
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.1e-50 203.8 151 66.9
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 1.8e-50 203.0 154 65.6
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 1.8e-50 203.0 156 61.5
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 4.1e-50 201.8 156 66.0
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 6.9e-50 201.1 180 57.8
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 2.6e-49 199.1 155 61.9
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 2.6e-49 199.1 155 60.6
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 3.8e-48 195.3 152 63.8
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 5.0e-48 194.9 148 67.6
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 5.0e-48 194.9 150 64.0
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 6.5e-48 194.5 143 69.2
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.1e-47 193.7 148 66.9
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 1.1e-47 193.7 149 66.4
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 1.4e-47 193.4 166 62.0
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 3.2e-47 192.2 156 62.2
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 3.2e-47 192.2 143 68.5
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 5.5e-47 191.4 164 60.4
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 9.4e-47 190.7 157 60.5
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 9.4e-47 190.7 147 65.3
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 2.1e-46 189.5 144 66.0
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 3.6e-46 188.7 147 64.6
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 3.6e-46 188.7 147 63.9
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 4.7e-46 188.3 156 59.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.3e-45 186.0 165 59.4
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 5.1e-45 184.9 109 81.7
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 5.1e-45 184.9 159 57.9
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 5.1e-45 184.9 157 60.5
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 8.8e-45 184.1 138 65.9
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 8.8e-45 184.1 156 59.6
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.0e-44 183.0 147 66.7
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 2.6e-44 182.6 165 59.4
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 2.6e-44 182.6 150 65.3
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 4.4e-44 181.8 143 62.2
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 9.7e-44 180.6 147 59.2
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 9.7e-44 180.6 154 55.8
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 9.7e-44 180.6 147 66.0
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.3e-43 180.3 160 58.8
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 2.8e-43 179.1 143 66.4
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 4.8e-43 178.3 151 58.3
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 8.2e-43 177.6 147 60.5
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 1.1e-42 177.2 142 63.4
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 1.4e-42 176.8 151 57.6
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.4e-42 176.8 150 60.0
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 1.8e-42 176.4 143 65.0
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.8e-42 176.4 146 61.6
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 9.1e-42 174.1 146 60.3
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 9.1e-42 174.1 138 60.1
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 1.6e-41 173.3 148 59.5
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.6e-41 173.3 159 54.7
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.6e-41 172.6 127 66.1
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 5.9e-41 171.4 144 60.4
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 5.9e-41 171.4 143 62.2
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.3e-40 170.2 142 60.6
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.3e-40 170.2 148 58.1
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.3e-40 170.2 149 61.1
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 1.7e-40 169.9 142 61.3
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 1.7e-40 169.9 149 59.1
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.7e-40 169.9 150 55.3
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.2e-40 169.5 169 54.4
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.2e-40 169.5 169 54.4
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 2.2e-40 169.5 169 54.4
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 2.9e-40 169.1 161 55.3
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 2.9e-40 169.1 161 55.3
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 5.0e-40 168.3 138 65.2
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 8.5e-40 167.5 153 58.2
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 8.5e-40 167.5 153 58.2
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 8.5e-40 167.5 162 56.2
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.1e-39 167.2 153 58.2
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 1.9e-39 166.4 161 52.8
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.2e-38 163.7 197 47.2
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 2.1e-38 162.9 185 49.7
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.4e-37 160.2 179 46.4
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 1.5e-36 156.8 141 56.0
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 2.0e-36 156.4 129 60.5
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.0e-36 156.4 126 61.9
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.3e-36 155.6 126 61.1
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 6.3e-35 151.4 141 58.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 6.3e-35 151.4 90 76.7
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 1.4e-34 150.2 114 61.4
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.6e-33 146.7 110 61.8
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 4.5e-33 145.2 113 60.2
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 4.5e-33 145.2 146 52.7
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 1.0e-32 144.1 113 62.8
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 1.3e-32 143.7 110 60.9
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 2.9e-32 142.5 89 75.3
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 2.9e-32 142.5 139 52.5
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 6.5e-32 141.4 160 45.6
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 1.1e-31 140.6 113 61.1
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.0e-29 134.0 83 73.5
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.3e-29 132.9 142 52.1
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 3.0e-29 132.5 196 40.3
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 4.4e-28 128.6 199 39.2
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 2.4e-26 122.9 99 63.6
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.0e-24 117.5 135 41.5
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.2e-23 112.5 146 43.8
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 1.6e-22 110.2 205 35.6
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 3.6e-22 109.0 165 38.2
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 6.8e-21 104.8 142 42.3
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 8.3e-19 97.8 156 39.7
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 3.1e-18 95.9 65 64.6
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.0e-17 93.2 113 45.1
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 3.5e-17 92.4 111 43.2
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.7e-17 91.3 64 64.1
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.7e-11 73.6 98 42.9
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 7.0e-10 68.2 70 40.0
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 4.6e-09 65.5 81 40.7
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 2.1e-06 56.6 99 28.3


User provided reference genes

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