Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027176 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 7.1e-162 573.9 301 100.0
CSS0048625 Camellia sinensis var. sinensis HOM05D005936 ORTHO05D007967 7.1e-162 573.9 301 100.0
Actinidia34080 Actinidia chinensis HOM05D005936 ORTHO05D007967 2.2e-147 525.8 301 90.7
Potri.015G135400 Populus trichocarpa HOM05D005936 ORTHO05D007967 1.8e-141 506.1 301 86.7
Gohir.D09G040700 Gossypium hirsutum HOM05D005936 ORTHO05D007967 1.2e-140 503.4 301 86.4
Gorai.006G046600 Gossypium raimondii HOM05D005936 ORTHO05D007967 1.2e-140 503.4 301 86.4
vmacro06722 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 1.5e-140 503.1 304 86.8
Duzib084G0661 Durio zibethinus HOM05D005936 ORTHO05D007967 4.5e-140 501.5 301 86.4
Thecc.03G170800 Theobroma cacao HOM05D005936 ORTHO05D007967 1.3e-139 500.0 301 84.7
Prupe.2G290400 Prunus persica HOM05D005936 ORTHO05D007967 2.2e-139 499.2 300 86.7
Gohir.A09G039900 Gossypium hirsutum HOM05D005936 ORTHO05D007967 1.1e-138 496.9 301 85.4
Rhsim03G0177300 Rhododendron simsii HOM05D005936 ORTHO05D007967 2.4e-138 495.7 311 85.2
Hma1.2p1_0270F.1_g108440 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 5.4e-138 494.6 301 86.4
Cfa008280 Carpinus fangiana HOM05D005936 ORTHO05D007967 2.7e-137 492.3 301 84.4
CiPaw.04G067400 Carya illinoinensis HOM05D005936 ORTHO05D007967 1.8e-136 489.6 301 83.7
QL09p014981 Quercus lobata HOM05D005936 ORTHO05D007967 2.3e-136 489.2 300 84.0
Eucgr.A02812 Eucalyptus grandis HOM05D005936 ORTHO05D007967 3.0e-136 488.8 301 84.4
Nitab4.5_0005024g0030 Nicotiana tabacum HOM05D005936 ORTHO05D007967 5.1e-136 488.0 307 82.7
FAN03G0200 Fragaria x ananassa HOM05D005936 ORTHO05D007967 1.5e-135 486.5 301 84.4
GSVIVG01010618001 Vitis vinifera HOM05D005936 ORTHO05D007967 1.5e-135 486.5 302 85.4
MD07G1264500 Malus domestica HOM05D005936 ORTHO05D007967 1.9e-135 486.1 302 83.8
FAN03G0500 Fragaria x ananassa HOM05D005936 ORTHO05D007967 2.5e-135 485.7 301 84.1
FvH4_7g29020 Fragaria vesca HOM05D005936 ORTHO05D007967 3.3e-135 485.3 302 84.8
FAN06G1408 Fragaria x ananassa HOM05D005936 ORTHO05D007967 3.3e-135 485.3 302 84.8
Nitab4.5_0001083g0080 Nicotiana tabacum HOM05D005936 ORTHO05D007967 5.6e-135 484.6 308 82.1
Oeu021758.1 Olea europaea HOM05D005936 ORTHO05D007967 5.6e-135 484.6 301 83.1
CANSAT21G0538 Cannabis sativa HOM05D005936 ORTHO05D007967 9.6e-135 483.8 303 84.2
FAN06G0122 Fragaria x ananassa HOM05D005936 ORTHO05D007967 1.6e-134 483.0 302 84.4
CANSAT21G1747 Cannabis sativa HOM05D005936 ORTHO05D007967 6.2e-134 481.1 301 84.4
DCAR_018171 Daucus carota HOM05D005936 ORTHO05D007967 1.1e-133 480.3 301 82.1
Sabra15G0147400 Salix brachista HOM05D005936 ORTHO05D007967 1.1e-133 480.3 296 84.1
PGR042G3346 Punica granatum HOM05D005936 ORTHO05D007967 2.4e-133 479.2 305 83.0
CsaV3_3G016820 Cucumis sativus L. HOM05D005936 ORTHO05D007967 6.9e-133 477.6 301 82.7
Peaxi162Scf00915g00243 Petunia axillaris HOM05D005936 ORTHO05D007967 9.0e-133 477.2 302 81.5
ClCG05G007820 Citrullus lanatus HOM05D005936 ORTHO05D007967 1.2e-132 476.9 301 82.4
TAR374G0336 Trochodendron aralioides HOM05D005936 ORTHO05D007967 1.2e-132 476.9 301 82.4
TPR.G17430 Trifolium pratense HOM05D005936 ORTHO05D007967 2.0e-132 476.1 304 83.6
Cc00_g24160 Coffea canephora HOM05D005936 ORTHO05D007967 5.8e-132 474.6 305 83.3
RcHm_v2.0_Chr1g0376731 Rosa chinensis HOM05D005936 ORTHO05D007967 5.8e-132 474.6 300 83.0
PGSC0003DMG400014268 Solanum tuberosum HOM05D005936 ORTHO05D007967 7.6e-132 474.2 301 81.1
Nn1g01364 Nelumbo nucifera HOM05D005936 ORTHO05D007967 9.9e-132 473.8 294 82.0
Lsat_1_v5_gn_8_7461 Lactuca sativa HOM05D005936 ORTHO05D007967 1.3e-131 473.4 303 82.8
Ah.13g068310 Amaranthus hybridus HOM05D005936 ORTHO05D007967 2.9e-131 472.2 304 84.2
Migut.F00375 Erythranthe guttata HOM05D005936 ORTHO05D007967 4.9e-131 471.5 295 83.1
LjContig00238g0017909 Lotus japonicus HOM05D005936 ORTHO05D007967 1.9e-130 469.5 303 82.8
Solyc03g026210.4 Solanum lycopersicum HOM05D005936 ORTHO05D007967 1.9e-130 469.5 301 81.1
HanXRQChr13g0405681 Helianthus annuus HOM05D005936 ORTHO05D007967 7.1e-130 467.6 303 80.5
Lalb_Chr21g0304951 Lupinus albus HOM05D005936 ORTHO05D007967 1.2e-129 466.8 303 81.8
Ciclev10005510m.g Citrus clementina HOM05D005936 ORTHO05D007967 3.5e-129 465.3 290 83.1
PSO478G3778 Papaver somniferum HOM05D005936 ORTHO05D007967 4.6e-129 464.9 302 81.5
THA.LOC104811994 Tarenaya hassleriana HOM05D005936 ORTHO05D007967 4.6e-129 464.9 281 84.3
Medtr1g101400 Medicago truncatula HOM05D005936 ORTHO05D007967 7.9e-129 464.2 304 81.9
AUR62021235 Chenopodium quinoa HOM05D005936 ORTHO05D007967 1.0e-128 463.8 285 84.2
Glyma.10G238800 Glycine max HOM05D005936 ORTHO05D007967 1.0e-128 463.8 303 81.8
COL.COLO4_14264 Corchorus olitorius HOM05D005936 ORTHO05D007967 1.3e-128 463.4 301 80.7
SalBow1G7635 Salvia bowleyana HOM05D005936 ORTHO05D007967 3.9e-128 461.8 301 79.7
Phvul.007G066600 Phaseolus vulgaris HOM05D005936 ORTHO05D007967 3.3e-127 458.8 304 80.6
AUR62016030 Chenopodium quinoa HOM05D005936 ORTHO05D007967 5.6e-127 458.0 293 82.3
VMungo0720G1210 Vigna mungo HOM05D005936 ORTHO05D007967 7.4e-127 457.6 304 79.9
Hma1.2p1_0010F.1_g006890 Hydrangea macrophylla HOM05D005936 ORTHO05D007967 2.8e-126 455.7 262 91.6
BraA03t10875Z Brassica rapa HOM05D005936 ORTHO05D007967 3.7e-126 455.3 302 79.1
BcaC01g06163 Brassica carinata HOM05D005936 ORTHO05D007967 4.8e-126 454.9 302 78.8
BolC3t14249H Brassica oleracea HOM05D005936 ORTHO05D007967 4.8e-126 454.9 302 78.8
BcaB01g04183 Brassica carinata HOM05D005936 ORTHO05D007967 8.2e-126 454.1 302 78.1
Aqoxy7G00442 Aquilegia oxysepala HOM05D005936 ORTHO05D007967 1.1e-125 453.8 301 78.7
AT5G52100 Arabidopsis thaliana HOM05D005936 ORTHO05D007967 1.1e-125 453.8 282 82.3
Aa31LG3G8470 Aethionema arabicum HOM05D005936 ORTHO05D007967 1.8e-125 453.0 287 81.2
ATR0757G004 Amborella trichopoda HOM05D005936 ORTHO05D007967 1.8e-125 453.0 282 82.3
AL8G26470 Arabidopsis lyrata HOM05D005936 ORTHO05D007967 5.3e-125 451.4 282 82.3
Carub.0008s1218 Capsella rubella HOM05D005936 ORTHO05D007967 6.9e-125 451.1 282 81.2
Sp6g14350 Schrenkiella parvula HOM05D005936 ORTHO05D007967 1.2e-124 450.3 282 81.2
SpUn0060_0040 Schrenkiella parvula HOM05D005936 ORTHO05D007967 1.2e-124 450.3 282 81.2
ECA233G0165 Erigeron canadensis HOM05D005936 ORTHO05D007967 2.0e-124 449.5 272 84.2
arahy.Tifrunner.gnm1.ann1.UTGK89 Arachis hypogaea HOM05D005936 ORTHO05D007967 3.4e-124 448.7 310 78.4
PSO782G1152 Papaver somniferum HOM05D005936 ORTHO05D007967 1.3e-123 446.8 292 80.8
Dinv28478 Davidia involucrata HOM05D005936 ORTHO05D007967 1.3e-120 436.8 262 86.3
A03p15850 Brassica napus HOM05D005936 ORTHO05D007967 2.5e-119 432.6 291 77.7
EL10Ac3g05696 Beta vulgaris HOM05D005936 ORTHO05D007967 7.4e-119 431.0 283 79.9
Manes.06G143900 Manihot esculenta HOM05D005936 ORTHO05D007967 9.0e-117 424.1 294 76.2
arahy.Tifrunner.gnm1.ann1.AYWY8E Arachis hypogaea HOM05D005936 ORTHO05D007967 3.4e-116 422.2 331 72.8
C03p18520 Brassica napus HOM05D005936 ORTHO05D007967 1.0e-115 420.6 316 71.8
Lj1C993G3 Lonicera japonica HOM05D005936 ORTHO05D007967 3.2e-114 415.6 303 75.6
Os03g0118600 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 7.9e-113 411.0 303 69.6
TWI23G0201 Tripterygium wilfordii HOM05D005936 ORTHO05D007967 7.9e-113 411.0 293 76.1
MELO3C006876.2 Cucumis melo HOM05D005936 ORTHO05D007967 1.0e-112 410.6 264 81.4
Haze_13754 Corylus avellana HOM05D005936 ORTHO05D007967 1.7e-110 403.3 273 78.8
MBI12_g29760_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.4e-109 400.2 301 72.4
unitig_0.g2488 Utricularia gibba HOM05D005936 ORTHO05D007967 4.1e-109 398.7 303 70.0
Psat6g200960 Pisum sativum HOM05D005936 ORTHO05D007967 6.9e-109 397.9 241 85.5
Ca_10793_v3 Cicer arietinum L. HOM05D005936 ORTHO05D007967 1.2e-105 387.1 265 80.8
Sed0016287 Sechium edule HOM05D005936 ORTHO05D007967 3.7e-102 375.6 220 87.7
CDE09G1316 Ceratophyllum demersum HOM05D005936 ORTHO05D007967 1.5e-100 370.2 241 78.4
Actinidia32894 Actinidia chinensis HOM05D005936 ORTHO05D007967 3.9e-96 355.5 242 81.4
SEGI_11434 Sequoiadendron giganteum HOM05D005936 ORTHO05D007967 3.3e-95 352.4 292 62.3
TAR375G0526 Trochodendron aralioides HOM05D005936 ORTHO05D007967 4.8e-94 348.6 263 73.0
Thhalv10014460m.g Eutrema salsugineum HOM05D005936 ORTHO05D007967 6.1e-89 331.6 210 81.4
Glyma.20G155600 Glycine max HOM05D005936 ORTHO05D007967 1.7e-86 323.6 220 79.1
vmacro06720 Vaccinium macrocarpon HOM05D005936 ORTHO05D007967 2.8e-86 322.8 265 67.5
Pp3c21_9920 Physcomitrium patens HOM05D005936 ORTHO05D007967 4.1e-85 318.9 278 60.1
SMO367G1305 Selaginella moellendorffii HOM05D005936 ORTHO05D007967 3.6e-81 305.8 266 57.5
MD01G1197100 Malus domestica HOM05D005936 ORTHO05D007967 3.0e-80 302.8 321 57.9
Mapoly0001s0282 Marchantia polymorpha HOM05D005936 ORTHO05D007967 4.0e-80 302.4 283 57.6
Hund04704 Selenicereus undatus HOM05D005936 ORTHO05D007967 2.8e-78 296.2 250 66.4
MD01G1197000 Malus domestica HOM05D005936 ORTHO05D007967 1.8e-69 266.9 307 55.7
Zm00001eb001140 Zea mays HOM05D005936 ORTHO05D007967 4.1e-69 265.8 190 72.1
CBR_g30244 Chara braunii HOM05D005936 ORTHO05D007967 5.0e-67 258.8 284 48.6
MBI12_g45864_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.0e-63 246.9 223 63.2
MBI18_g06814_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.9e-62 243.0 212 63.2
MBI18_g40469_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 4.1e-61 239.2 182 71.4
MSTRG.8763 Avicennia marina HOM05D005936 ORTHO05D007967 1.6e-57 227.3 157 77.1
Duzib205G1997 Durio zibethinus HOM05D005936 ORTHO05D007967 1.4e-56 224.2 194 67.5
Cpa.g.sc107.7 Carica papaya HOM05D005936 ORTHO05D007967 5.8e-55 218.8 145 80.7
CARHR265020 Cardamine hirsuta HOM05D005936 ORTHO05D007967 2.2e-54 216.9 138 81.2
CAN.G548.3 Capsicum annuum HOM05D005936 ORTHO05D007967 4.9e-54 215.7 157 72.6
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis HOM05D003851 ORTHO05D005657 2.7e-52 209.9 194 58.8
Sopen03g005080 Solanum pennellii HOM05D005936 ORTHO05D007967 1.2e-49 201.1 121 84.3
MBI09_g40772_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 6.8e-48 195.3 153 69.9
Os03g0117000 Oryza sativa ssp. japonica HOM05D005936 ORTHO05D007967 2.6e-47 193.4 186 58.1
FAN01G1428 Fragaria x ananassa HOM05D005936 ORTHO05D007967 7.5e-47 191.8 194 58.8
MBI18_g34964_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 1.1e-45 188.0 153 66.7
Cpa.g.sc107.8 Carica papaya HOM05D005936 ORTHO05D007967 1.2e-44 184.5 118 80.5
MBI18_g28463_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.7e-44 183.3 154 66.2
MBI08_g23116_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 6.8e-40 168.7 138 66.7
MBI07_g12175_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 8.1e-33 145.2 157 56.1
MBI15_g15729_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 8.1e-17 92.0 83 61.4
RcHm_v2.0_Chr1g0376771 Rosa chinensis HOM05D005936 ORTHO05D342530 4.9e-14 82.8 134 43.3
MBI16_g19597_MAGBIO Magnolia biondii HOM05D005936 ORTHO05D007967 2.1e-09 67.4 88 47.7
VMungo1127G1192 Vigna mungo HOM05D005936 ORTHO05D000671 6.5e-06 55.8 123 35.0


User provided reference genes

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