Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.7e-252 875.2 556 100.0
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 5.7e-234 814.3 574 93.6
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 1.6e-175 620.2 574 65.2
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 3.7e-172 609.0 575 63.3
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.8e-156 556.2 567 62.1
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.1e-155 552.7 583 58.5
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 3.0e-150 536.2 573 57.4
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 3.0e-150 536.2 574 68.6
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 3.3e-149 532.7 575 60.0
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 4.1e-147 525.8 572 57.9
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 7.7e-146 521.5 578 67.0
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.4e-144 517.3 574 58.5
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.4e-144 517.3 574 60.6
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.5e-144 516.5 578 66.3
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 3.2e-144 516.2 574 58.4
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.2e-143 514.2 574 54.5
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 6.1e-143 511.9 573 58.6
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 7.9e-143 511.5 579 66.8
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 6.5e-137 491.9 578 59.2
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 8.5e-137 491.5 576 57.3
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.5e-136 490.7 574 55.4
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 4.2e-136 489.2 573 56.5
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 4.2e-136 489.2 581 64.4
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 4.2e-136 489.2 562 55.2
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 9.4e-136 488.0 574 52.4
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.6e-135 487.3 572 60.8
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 3.6e-135 486.1 578 57.4
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 1.0e-134 484.6 575 56.9
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.8e-134 483.8 575 65.7
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 4.0e-134 482.6 578 59.3
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.2e-133 481.1 581 64.4
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.5e-133 480.7 578 54.0
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 2.6e-133 479.9 578 56.7
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 3.3e-133 479.6 573 53.8
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.3e-132 477.6 430 60.5
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.4e-131 474.2 583 55.7
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.4e-131 474.2 576 55.7
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 1.8e-131 473.8 577 53.7
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 1.2e-130 471.1 573 53.6
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 4.5e-130 469.2 582 54.8
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.5e-130 469.2 569 51.7
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.3e-129 467.6 576 55.7
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 1.7e-129 467.2 576 51.9
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 3.8e-129 466.1 583 53.2
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.6e-127 460.7 584 51.2
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 6.1e-127 458.8 621 48.0
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 8.0e-127 458.4 577 56.0
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.0e-126 458.0 579 50.8
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.0e-126 458.0 578 50.7
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.8e-126 457.2 582 55.8
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 5.2e-126 455.7 579 46.8
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 1.5e-125 454.1 579 50.6
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.5e-125 454.1 577 51.0
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 2.0e-125 453.8 577 52.5
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 5.7e-125 452.2 603 49.8
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 9.8e-125 451.4 578 53.1
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 2.2e-124 450.3 572 58.4
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 2.8e-124 449.9 576 55.6
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 4.8e-124 449.1 576 61.3
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 6.3e-124 448.7 580 50.0
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 2.3e-121 440.3 428 55.8
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 6.5e-121 438.7 574 52.6
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 3.2e-120 436.4 578 49.5
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 3.2e-120 436.4 576 53.3
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 5.5e-120 435.6 576 50.5
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 7.2e-120 435.3 582 57.0
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 1.4e-118 431.0 580 51.7
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.4e-118 431.0 579 58.4
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.3e-118 430.3 576 50.7
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 6.8e-118 428.7 575 56.0
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 6.8e-118 428.7 582 58.8
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 4.1e-115 419.5 416 57.5
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 2.5e-112 410.2 576 55.7
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 3.0e-110 403.3 417 53.5
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 6.8e-110 402.1 417 57.1
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.3e-108 397.9 417 56.8
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.7e-108 397.5 417 56.6
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.9e-108 396.7 587 44.6
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.8e-107 394.0 418 55.7
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 6.6e-105 385.6 587 48.6
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 5.6e-104 382.5 423 50.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 3.6e-103 379.8 593 52.4
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 1.1e-102 378.3 584 49.8
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 8.9e-102 375.2 403 51.6
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.4e-99 367.9 554 54.3
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.3e-97 360.5 419 53.0
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 3.0e-97 360.1 580 47.1
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 1.2e-95 354.8 414 51.2
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 3.6e-95 353.2 413 48.2
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.4e-94 351.3 589 43.1
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 6.8e-94 349.0 418 49.8
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.2e-93 348.2 415 50.8
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 2.6e-93 347.1 414 51.4
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 1.6e-90 337.8 415 51.8
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 7.3e-88 328.9 391 48.3
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 2.9e-84 317.0 417 49.9
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 2.9e-84 317.0 417 49.9
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 3.8e-84 316.6 416 49.0
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 9.2e-83 312.0 284 57.0
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 6.4e-76 289.3 268 58.6
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.3e-73 281.6 589 43.8
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 9.0e-70 268.9 417 44.4
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.9e-64 251.1 553 40.9
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 2.5e-64 250.8 420 39.3
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.3e-54 216.5 223 56.1
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 1.2e-42 178.7 221 46.6
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 3.6e-42 177.2 203 51.7
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.1e-38 165.6 453 30.0
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 8.8e-33 146.0 227 41.0
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.1e-27 129.0 290 33.4
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 2.2e-20 104.8 167 44.3
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.2e-18 99.0 325 29.8
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 1.0e-12 79.3 50 72.0
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 2.9e-12 77.8 187 54.5


User provided reference genes

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