Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048581 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 2.4e-81 305.4 153 100.0
CSS0010276 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 7.9e-77 290.4 145 100.0
QL02p014091 Quercus lobata HOM05D005297 ORTHO05D006545 4.5e-72 274.6 145 93.8
Haze_23424 Corylus avellana HOM05D005297 ORTHO05D006545 1.0e-71 273.5 145 92.4
Sabra09G0113000 Salix brachista HOM05D005297 ORTHO05D006545 2.9e-71 271.9 145 91.0
Sabra09G0115400 Salix brachista HOM05D005297 ORTHO05D006545 2.9e-71 271.9 145 91.0
Atru.chr3.3335 Acer truncatum HOM05D005297 ORTHO05D006545 8.5e-71 270.4 145 91.0
vmacro03296 Vaccinium macrocarpon HOM05D005297 ORTHO05D006545 1.1e-70 270.0 145 90.3
Eucgr.J00466 Eucalyptus grandis HOM05D005297 ORTHO05D006545 2.5e-70 268.9 145 90.3
Manes.11G159700 Manihot esculenta HOM05D005297 ORTHO05D006545 3.2e-70 268.5 145 89.7
Potri.009G146100 Populus trichocarpa HOM05D005297 ORTHO05D006545 3.2e-70 268.5 145 90.3
PGR119G1280 Punica granatum HOM05D005297 ORTHO05D006545 3.2e-70 268.5 145 90.3
Sed0022012 Sechium edule HOM05D005297 ORTHO05D006545 3.2e-70 268.5 145 90.3
Dinv29444 Davidia involucrata HOM05D005297 ORTHO05D006545 9.4e-70 266.9 145 89.7
TAR623G0730 Trochodendron aralioides HOM05D005297 ORTHO05D006545 9.4e-70 266.9 145 91.0
Nitab4.5_0003532g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 1.2e-69 266.5 145 91.0
Rhsim05G0032500 Rhododendron simsii HOM05D005297 ORTHO05D006545 1.2e-69 266.5 150 86.7
MELO3C003122.2 Cucumis melo HOM05D005297 ORTHO05D006545 2.1e-69 265.8 145 89.0
CsaV3_4G024870 Cucumis sativus L. HOM05D005297 ORTHO05D006545 2.1e-69 265.8 145 89.7
Gorai.001G120900 Gossypium raimondii HOM05D005297 ORTHO05D006545 2.1e-69 265.8 145 89.7
Hma1.2p1_0305F.1_g119460 Hydrangea macrophylla HOM05D005297 ORTHO05D006545 2.1e-69 265.8 137 94.9
Manes.14G159600 Manihot esculenta HOM05D005297 ORTHO05D006545 4.7e-69 264.6 144 88.9
Gohir.A07G108700 Gossypium hirsutum HOM05D005297 ORTHO05D006545 6.1e-69 264.2 145 89.0
Gohir.A07G108780 Gossypium hirsutum HOM05D005297 ORTHO05D006545 6.1e-69 264.2 145 89.0
RcHm_v2.0_Chr5g0054901 Rosa chinensis HOM05D005297 ORTHO05D006545 6.1e-69 264.2 145 86.9
Solyc11g067150.2 Solanum lycopersicum HOM05D005297 ORTHO05D006545 6.1e-69 264.2 145 89.0
Sopen11g026830 Solanum pennellii HOM05D005297 ORTHO05D006545 6.1e-69 264.2 145 89.0
Rhsim13G0108000 Rhododendron simsii HOM05D005297 ORTHO05D006545 7.9e-69 263.8 145 89.0
Thecc.09G287800 Theobroma cacao HOM05D005297 ORTHO05D006545 1.0e-68 263.5 145 89.7
Gohir.D07G112500 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.4e-68 263.1 145 88.3
Nn2g14072 Nelumbo nucifera HOM05D005297 ORTHO05D006545 1.4e-68 263.1 145 88.3
RcHm_v2.0_Chr5g0054661 Rosa chinensis HOM05D005297 ORTHO05D006545 1.8e-68 262.7 145 86.2
PGSC0003DMG400007409 Solanum tuberosum HOM05D005297 ORTHO05D006545 1.8e-68 262.7 145 88.3
Prupe.6G124400 Prunus persica HOM05D005297 ORTHO05D006545 2.3e-68 262.3 145 86.9
Rhsim13G0108200 Rhododendron simsii HOM05D005297 ORTHO05D006545 2.3e-68 262.3 142 90.1
MD11G1160800 Malus domestica HOM05D005297 ORTHO05D006545 3.0e-68 261.9 145 86.2
THA.LOC104799541 Tarenaya hassleriana HOM05D005297 ORTHO05D006545 5.1e-68 261.2 145 86.9
Migut.N00940 Erythranthe guttata HOM05D005297 ORTHO05D006545 6.7e-68 260.8 145 86.9
Lj2g0006626 Lotus japonicus HOM05D005297 ORTHO05D006545 6.7e-68 260.8 145 85.5
GSVIVG01036187001 Vitis vinifera HOM05D005297 ORTHO05D006545 6.7e-68 260.8 137 92.7
ECA236G0310 Erigeron canadensis HOM05D005297 ORTHO05D006545 8.8e-68 260.4 145 86.9
CAN.G644.6 Capsicum annuum HOM05D005297 ORTHO05D006545 1.1e-67 260.0 145 87.6
Duzib150G0109 Durio zibethinus HOM05D005297 ORTHO05D006545 1.1e-67 260.0 145 87.6
HanXRQChr13g0408991 Helianthus annuus HOM05D005297 ORTHO05D006545 1.5e-67 259.6 145 86.2
Aqoxy4G02831 Aquilegia oxysepala HOM05D005297 ORTHO05D006545 2.0e-67 259.2 145 86.2
CiPaw.13G138500 Carya illinoinensis HOM05D005297 ORTHO05D006545 2.0e-67 259.2 168 79.8
SGA_v2.0_scaffold147G36360 Striga asiatica HOM05D005297 ORTHO05D006545 2.0e-67 259.2 143 87.4
TAR369G0691 Trochodendron aralioides HOM05D005297 ORTHO05D006545 2.0e-67 259.2 146 88.4
Medtr4g088775 Medicago truncatula HOM05D005297 ORTHO05D006545 2.6e-67 258.8 145 85.5
unitig_736.g22397 Utricularia gibba HOM05D005297 ORTHO05D006545 2.6e-67 258.8 145 86.9
MBI17_g16878_MAGBIO Magnolia biondii HOM05D005297 ORTHO05D006545 4.4e-67 258.1 144 84.7
Lalb_Chr24g0395231 Lupinus albus HOM05D005297 ORTHO05D006545 5.7e-67 257.7 145 84.1
MSTRG.18743 Avicennia marina HOM05D005297 ORTHO05D006545 7.4e-67 257.3 145 86.2
Ca_09074_v3 Cicer arietinum L. HOM05D005297 ORTHO05D006545 9.7e-67 256.9 148 83.8
COL.COLO4_19936 Corchorus olitorius HOM05D005297 ORTHO05D006545 9.7e-67 256.9 137 91.2
Lsat_1_v5_gn_8_117180 Lactuca sativa HOM05D005297 ORTHO05D006545 9.7e-67 256.9 145 84.8
Nitab4.5_0021448g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 9.7e-67 256.9 137 92.0
Psat2g130440 Pisum sativum HOM05D005297 ORTHO05D006545 9.7e-67 256.9 145 84.8
SalBow6G5239 Salvia bowleyana HOM05D005297 ORTHO05D006545 9.7e-67 256.9 143 86.7
Glyma.12G183000 Glycine max HOM05D005297 ORTHO05D006545 1.3e-66 256.5 145 84.1
Glyma.13G318100 Glycine max HOM05D005297 ORTHO05D006545 1.3e-66 256.5 145 84.1
VMungo1080G0855 Vigna mungo HOM05D005392 ORTHO05D006709 1.3e-66 256.5 145 84.8
FAN21G1663 Fragaria x ananassa HOM05D005297 ORTHO05D006545 2.8e-66 255.4 145 84.1
Medtr0227s0030 Medicago truncatula HOM05D005297 ORTHO05D006545 3.7e-66 255.0 145 84.1
Peaxi162Scf00544g00918 Petunia axillaris HOM05D005297 ORTHO05D006545 3.7e-66 255.0 137 91.2
BcaC04g21280 Brassica carinata HOM05D005297 ORTHO05D006545 8.2e-66 253.8 145 85.5
CAN.G1177.8 Capsicum annuum HOM05D005297 ORTHO05D006545 8.2e-66 253.8 137 89.1
FAN16G3468 Fragaria x ananassa HOM05D005297 ORTHO05D006545 8.2e-66 253.8 145 83.4
arahy.Tifrunner.gnm1.ann1.CT6H1M Arachis hypogaea HOM05D005297 ORTHO05D006545 1.4e-65 253.1 145 82.8
BcaB01g01797 Brassica carinata HOM05D005297 ORTHO05D006545 2.4e-65 252.3 145 84.8
Sp6g04610 Schrenkiella parvula HOM05D005297 ORTHO05D006545 2.4e-65 252.3 145 84.8
Hund18738 Selenicereus undatus HOM05D005297 ORTHO05D006545 2.4e-65 252.3 143 85.3
EL10Ac7g15793 Beta vulgaris HOM05D005297 ORTHO05D006545 3.1e-65 251.9 145 83.4
Thhalv10029010m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 4.1e-65 251.5 145 84.1
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea HOM05D005780 ORTHO05D006545 5.3e-65 251.1 138 86.2
Cc01_g09520 Coffea canephora HOM05D005297 ORTHO05D006545 5.3e-65 251.1 137 89.8
Sc15g0007560 Simmondsia chinensis HOM05D005297 ORTHO05D006545 5.3e-65 251.1 145 83.4
Aa31LG6G1540 Aethionema arabicum HOM05D005297 ORTHO05D006545 7.0e-65 250.8 145 83.4
CANSAT64G2769 Cannabis sativa HOM05D005297 ORTHO05D006545 7.0e-65 250.8 145 83.4
Carub.0006s3210 Capsella rubella HOM05D005297 ORTHO05D006545 7.0e-65 250.8 145 84.1
A09p26430 Brassica napus HOM05D005297 ORTHO05D006545 1.2e-64 250.0 143 85.3
C09p33610 Brassica napus HOM05D002056 ORTHO05D002289 1.2e-64 250.0 143 85.3
Sc21g0007210 Simmondsia chinensis HOM05D005297 ORTHO05D006545 1.2e-64 250.0 145 84.1
CARHR253330 Cardamine hirsuta HOM05D005297 ORTHO05D006545 2.0e-64 249.2 145 83.4
Phvul.005G125900 Phaseolus vulgaris HOM05D005297 ORTHO05D006545 2.0e-64 249.2 145 82.1
FvH4_3g29610 Fragaria vesca HOM05D005297 ORTHO05D006545 3.5e-64 248.4 145 82.1
FAN11G1678 Fragaria x ananassa HOM05D005297 ORTHO05D006545 3.5e-64 248.4 145 82.1
Nitab4.5_0024933g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 4.5e-64 248.1 138 89.1
Sp7g17550 Schrenkiella parvula HOM05D005297 ORTHO05D006545 5.9e-64 247.7 145 82.8
AL6G47810 Arabidopsis lyrata HOM05D005297 ORTHO05D006545 1.0e-63 246.9 145 82.8
AT4G04190 Arabidopsis thaliana HOM05D005297 ORTHO05D006545 1.0e-63 246.9 145 82.8
Cpa.g.sc32.130 Carica papaya HOM05D005297 ORTHO05D006545 1.3e-63 246.5 137 86.9
PSO384G0067 Papaver somniferum HOM05D005297 ORTHO05D006545 1.3e-63 246.5 145 81.4
HPP92_006421 Vanilla planifolia HOM05D005297 ORTHO05D006545 1.7e-63 246.1 145 81.4
Ciclev10029400m.g Citrus clementina HOM05D005297 ORTHO05D006545 2.2e-63 245.7 145 84.1
arahy.Tifrunner.gnm1.ann1.Q11QUE Arachis hypogaea HOM05D005297 ORTHO05D006545 3.8e-63 245.0 157 77.7
PSO425G0036 Papaver somniferum HOM05D005297 ORTHO05D006545 3.8e-63 245.0 145 81.4
AUR62009792 Chenopodium quinoa HOM05D005297 ORTHO05D006545 8.5e-63 243.8 145 80.7
PSO170G0247 Papaver somniferum HOM05D005297 ORTHO05D006545 8.5e-63 243.8 145 80.0
Lsat_1_v5_gn_8_90380 Lactuca sativa HOM05D005297 ORTHO05D006545 2.5e-62 242.3 137 83.9
TWI79G0927 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 7.2e-62 240.7 145 80.7
BolC9t56195H Brassica oleracea HOM05D002056 ORTHO05D002289 9.4e-62 240.4 138 84.8
BraA09t38217Z Brassica rapa HOM05D005297 ORTHO05D006545 9.4e-62 240.4 138 84.8
Os04g0410300 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 9.4e-62 240.4 145 80.0
TWI79G0105 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 9.4e-62 240.4 145 80.7
Zm00001eb084080 Zea mays HOM05D005297 ORTHO05D006545 2.1e-61 239.2 145 80.0
PSO801G0702 Papaver somniferum HOM05D005297 ORTHO05D006545 4.7e-61 238.0 145 79.3
ATR0820G241 Amborella trichopoda HOM05D005297 ORTHO05D006545 6.1e-61 237.7 137 82.5
PSO339G0592 Papaver somniferum HOM05D005297 ORTHO05D006545 4.0e-60 235.0 145 77.9
SEGI_17822 Sequoiadendron giganteum HOM05D005297 ORTHO05D006545 9.7e-59 230.3 143 75.5
CSS0004713 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 1.7e-58 229.6 155 78.1
PSO339G2689 Papaver somniferum HOM05D005297 ORTHO05D006545 2.8e-58 228.8 145 76.6
Thhalv10005498m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 4.1e-57 224.9 146 76.7
PSO782G5408 Papaver somniferum HOM05D005297 ORTHO05D006545 5.3e-57 224.6 145 75.2
Os01g0191000 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 5.0e-55 218.0 143 74.1
Medtr4g073910 Medicago truncatula HOM05D005297 ORTHO05D006545 2.5e-54 215.7 135 80.0
Rhsim13G0107700 Rhododendron simsii HOM05D005297 ORTHO05D006545 6.8e-52 207.6 145 75.2
AUR62039239 Chenopodium quinoa HOM05D005297 ORTHO05D006545 1.3e-50 203.4 142 72.5
Lj2A987T34 Lonicera japonica HOM05D005297 ORTHO05D006545 1.1e-49 200.3 109 90.8
Pp3c27_2700 Physcomitrium patens HOM05D005297 ORTHO05D006545 1.1e-49 200.3 137 67.9
arahy.Tifrunner.gnm1.ann1.S3X3J8 Arachis hypogaea HOM05D005297 ORTHO05D006545 4.5e-48 194.9 110 84.5
Duzib168G0206 Durio zibethinus HOM05D005297 ORTHO05D006545 1.0e-47 193.7 117 84.6
CDE11G0319 Ceratophyllum demersum HOM05D005297 ORTHO05D006545 3.2e-46 188.7 117 77.8
Mapoly0068s0054 Marchantia polymorpha HOM05D005297 ORTHO05D006545 2.1e-45 186.0 145 59.3
Actinidia24196 Actinidia chinensis HOM05D005392 ORTHO05D006709 7.5e-43 177.6 130 68.5
MD03G1139300 Malus domestica HOM05D005297 ORTHO05D006545 6.3e-42 174.5 127 70.1
TPR.G2691 Trifolium pratense HOM05D005297 ORTHO05D006545 3.3e-38 162.2 99 78.8
Ca_05140_v3 Cicer arietinum L. HOM05D005297 ORTHO05D012218 9.5e-38 160.6 100 76.0
SHI11151 Sapria himalayana HOM05D005297 ORTHO05D000023 9.5e-38 160.6 111 72.1
CBR_g82609 Chara braunii HOM05D005297 ORTHO05D006545 1.4e-36 156.8 136 55.1
PSO782G3247 Papaver somniferum HOM05D005297 ORTHO05D006545 3.4e-35 152.1 96 77.1
Gorai.006G055300 Gossypium raimondii HOM05D005297 ORTHO05D006545 4.4e-35 151.8 77 93.5
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.8e-33 146.4 119 64.7
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 4.1e-33 145.2 119 64.7
CSS0043339 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 5.4e-33 144.8 139 58.3
Gorai.005G178100 Gossypium raimondii HOM05D005297 ORTHO05D006545 1.9e-30 136.3 77 83.1
arahy.Tifrunner.gnm1.ann1.LDL4WN Arachis hypogaea HOM05D005297 ORTHO05D006545 9.5e-30 134.0 93 72.0
Gohir.D09G053026 Gossypium hirsutum HOM05D005297 ORTHO05D006545 9.5e-30 134.0 77 85.7
Gohir.D06G133032 Gossypium hirsutum HOM05D005297 ORTHO05D006545 2.1e-29 132.9 68 91.2
DCAR_001100 Daucus carota HOM05D005297 ORTHO05D006545 2.6e-27 125.9 95 67.4
RcHm_v2.0_Chr5g0054771 Rosa chinensis HOM05D005297 ORTHO05D006545 2.7e-24 115.9 120 58.3
QL02p014117 Quercus lobata HOM05D005297 ORTHO05D006545 3.0e-23 112.5 64 87.5
Oeu050204.1 Olea europaea HOM05D005297 ORTHO05D006545 8.6e-23 110.9 154 47.4
Gohir.D02G158550 Gossypium hirsutum HOM05D005297 ORTHO05D006545 3.1e-20 102.4 77 68.8
TPR.G32973 Trifolium pratense HOM05D005297 ORTHO05D006545 4.9e-18 95.1 52 86.5
C02p40370 Brassica napus HOM05D000848 ORTHO05D000007 9.2e-17 90.9 66 66.7
Oeu046141.1 Olea europaea HOM05D005297 ORTHO05D006545 6.0e-16 88.2 50 84.0
BolC2t10071H Brassica oleracea HOM05D005297 ORTHO05D000007 3.0e-15 85.9 58 72.4
Psat2g121320 Pisum sativum HOM05D005297 ORTHO05D006545 3.9e-15 85.5 58 67.2
PSO541G0924 Papaver somniferum HOM05D005117 ORTHO05D005956 3.3e-06 55.8 33 78.8
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 9.6e-06 54.3 71 46.5


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