Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.4e-41 170.6 90 100.0
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.3e-38 161.4 90 92.2
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.1e-37 158.7 90 94.4
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.5e-32 141.4 88 86.4
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.0e-32 140.6 83 89.2
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.9e-30 135.6 74 94.6
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.8e-29 131.7 74 93.2
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 8.9e-28 126.7 74 89.2
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.2e-27 126.3 74 89.2
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 5.8e-27 124.0 73 87.7
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.3e-26 122.9 69 94.2
CSS0048440 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.8e-21 105.1 59 91.5
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 1.9e-17 92.4 74 59.5
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 1.5e-14 82.8 75 62.7
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 2.4e-12 75.5 77 57.1
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 2.6e-11 72.0 75 56.0
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 2.9e-10 68.6 75 50.7
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.8e-10 68.2 77 48.1
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 8.4e-10 67.0 75 50.7
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.4e-09 66.2 57 56.1
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 2.4e-09 65.5 76 53.9
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 5.4e-09 64.3 75 49.3
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 7.1e-09 63.9 74 48.6
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 1.2e-08 63.2 76 51.3
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.2e-08 63.2 57 54.4
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.1e-08 62.4 78 51.3
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 3.5e-08 61.6 59 50.8
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 3.5e-08 61.6 57 54.4
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.0e-07 60.1 57 52.6
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 1.7e-07 59.3 78 44.9
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 1.7e-07 59.3 78 47.4
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.3e-07 58.9 83 42.2
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 3.0e-07 58.5 44 59.1
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 3.0e-07 58.5 44 59.1
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 3.9e-07 58.2 77 42.9
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 6.6e-07 57.4 44 59.1
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 6.6e-07 57.4 73 42.5
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 8.7e-07 57.0 63 52.4
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 1.1e-06 56.6 80 41.2
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.5e-06 56.2 85 37.6
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 2.5e-06 55.5 74 39.2
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 3.3e-06 55.1 46 60.9
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 3.3e-06 55.1 46 60.9
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 3.3e-06 55.1 46 60.9
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 5.6e-06 54.3 46 58.7
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 5.6e-06 54.3 46 58.7
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 5.6e-06 54.3 60 45.0
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 9.6e-06 53.5 46 60.9
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 9.6e-06 53.5 44 54.5
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 9.6e-06 53.5 78 46.2


User provided reference genes

Program Settings