Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.0e-157 560.1 292 100.0
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 6.6e-157 557.4 292 99.7
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 4.8e-123 444.9 297 83.2
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 1.1e-114 417.2 292 77.1
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 2.4e-114 416.0 287 75.3
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 1.7e-112 409.8 322 70.5
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 2.2e-107 392.9 292 75.3
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 2.8e-107 392.5 303 68.6
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 4.1e-106 388.7 282 73.0
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 1.6e-105 386.7 305 71.8
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 4.5e-105 385.2 302 68.5
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 4.5e-105 385.2 305 71.5
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 5.9e-105 384.8 305 71.5
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 1.0e-104 384.0 306 67.0
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 3.8e-104 382.1 295 72.9
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 1.9e-103 379.8 287 73.5
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 1.9e-103 379.8 306 67.0
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 2.5e-103 379.4 294 72.4
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 3.2e-103 379.0 308 70.1
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 3.2e-103 379.0 294 72.1
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 3.2e-103 379.0 281 73.7
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 1.6e-102 376.7 285 68.8
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 2.1e-102 376.3 307 65.8
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 8.0e-102 374.4 298 72.1
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 3.0e-101 372.5 301 66.4
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 1.5e-100 370.2 305 69.2
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 4.4e-100 368.6 239 77.0
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 5.7e-100 368.2 307 69.1
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 5.7e-100 368.2 299 64.9
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 7.5e-100 367.9 294 71.4
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 8.2e-99 364.4 302 68.9
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 1.4e-98 363.6 303 68.3
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 7.0e-98 361.3 299 68.2
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 5.9e-97 358.2 295 65.4
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 7.7e-97 357.8 317 66.6
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 1.3e-96 357.1 298 68.1
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 1.7e-96 356.7 266 74.1
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 6.5e-96 354.8 294 69.7
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 1.1e-95 354.0 294 68.0
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 2.5e-95 352.8 289 69.2
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 4.2e-95 352.1 299 62.5
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 1.2e-94 350.5 297 69.0
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.6e-94 350.1 288 67.7
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 2.1e-94 349.7 296 67.9
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 2.7e-94 349.4 301 67.4
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 2.7e-94 349.4 272 69.9
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 1.0e-93 347.4 296 67.6
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 1.8e-93 346.7 302 65.9
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 2.3e-93 346.3 246 71.5
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 5.2e-93 345.1 259 73.7
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 5.2e-93 345.1 301 66.1
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 6.8e-93 344.7 259 74.1
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 8.8e-93 344.4 233 74.7
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 4.4e-92 342.0 309 65.7
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 9.8e-92 340.9 290 64.8
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 1.7e-91 340.1 256 68.8
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 2.2e-91 339.7 212 78.8
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 8.3e-91 337.8 310 60.3
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 1.1e-90 337.4 233 77.3
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 1.8e-90 336.7 268 66.8
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 1.6e-89 333.6 231 81.0
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 2.0e-89 333.2 233 76.0
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 2.7e-89 332.8 235 77.0
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 5.9e-89 331.6 291 62.9
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.3e-88 330.5 242 73.6
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 1.3e-88 330.5 296 64.5
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.3e-88 330.5 296 64.5
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 1.7e-88 330.1 213 75.6
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 3.8e-88 328.9 293 64.8
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 5.0e-88 328.6 300 60.7
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 6.5e-88 328.2 270 68.9
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.1e-87 327.4 296 64.2
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 2.5e-87 326.2 295 65.1
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 2.5e-87 326.2 219 78.1
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 5.5e-87 325.1 291 65.6
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 1.2e-86 323.9 302 62.3
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 1.2e-86 323.9 294 61.6
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.6e-86 323.6 292 64.4
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.6e-84 316.2 294 64.3
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 3.4e-84 315.8 279 61.3
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 5.7e-84 315.1 256 62.5
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 9.8e-84 314.3 255 70.6
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 1.7e-83 313.5 217 70.0
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.8e-83 312.8 194 76.3
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 6.3e-83 311.6 254 66.5
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 7.0e-82 308.1 258 65.1
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.6e-81 307.0 192 77.6
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 5.9e-81 305.1 312 59.9
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 5.9e-81 305.1 260 65.0
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 5.0e-80 302.0 217 71.0
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 5.0e-80 302.0 202 76.7
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 2.5e-79 299.7 263 68.1
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 4.3e-79 298.9 240 65.4
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 4.3e-79 298.9 264 57.6
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 2.1e-78 296.6 314 54.1
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 6.8e-77 291.6 262 62.6
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 1.4e-74 283.9 215 68.4
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 5.9e-73 278.5 250 57.6
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 1.0e-72 277.7 146 88.4
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 1.0e-72 277.7 255 57.3
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 3.0e-72 276.2 292 57.2
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 3.0e-72 276.2 209 66.0
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 2.3e-64 250.0 247 55.1
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 4.7e-62 242.3 120 95.8
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 5.4e-58 228.8 229 61.1
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 2.3e-48 196.8 232 52.6
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.4e-45 186.8 155 65.2
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.3e-43 181.0 134 65.7
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 4.9e-35 152.5 121 71.1
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 1.4e-34 151.0 179 57.5
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 3.0e-32 143.3 176 44.9
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 1.1e-29 134.8 204 42.6
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 6.9e-29 132.1 179 46.4
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 9.0e-29 131.7 132 59.1
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 1.2e-28 131.3 122 60.7
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 2.6e-28 130.2 112 67.0
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 1.1e-26 124.8 135 53.3
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 1.5e-23 114.4 64 82.8
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.6e-20 103.6 77 68.8
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 2.2e-19 100.5 180 34.4
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 6.7e-16 89.0 107 43.9
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 1.5e-15 87.8 55 74.5
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 1.3e-14 84.7 102 50.0
Cpa.g.sc685.1 Carica papaya HOM05D006234 ORTHO05D007813 1.5e-12 77.8 112 47.3
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 7.2e-10 68.9 204 33.8
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 7.2e-10 68.9 189 33.9
Manes.11G123700 Manihot esculenta HOM05D001043 ORTHO05D006432 7.2e-10 68.9 136 36.0
FvH4_4g10900 Fragaria vesca HOM05D001043 ORTHO05D006432 4.6e-09 66.2 137 35.8
FAN12G0575 Fragaria x ananassa HOM05D001043 ORTHO05D006432 6.1e-09 65.9 137 35.8
FAN17G1903 Fragaria x ananassa HOM05D001043 ORTHO05D006432 6.7e-08 62.4 112 35.7
Potri.017G027000 Populus trichocarpa HOM05D001043 ORTHO05D006432 6.7e-08 62.4 135 33.3
FAN07G1629 Fragaria x ananassa HOM05D001043 ORTHO05D006432 1.1e-07 61.6 143 32.9
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 1.5e-07 61.2 138 31.9
Thecc.04G175400 Theobroma cacao HOM05D001043 ORTHO05D006432 1.5e-07 61.2 137 34.3
Glyma.12G051100 Glycine max HOM05D001043 ORTHO05D006432 1.9e-07 60.8 112 37.5
SalBow3G0890 Salvia bowleyana HOM05D001251 ORTHO05D007813 1.9e-07 60.8 30 93.3
RcHm_v2.0_Chr4g0406481 Rosa chinensis HOM05D001043 ORTHO05D006432 2.5e-07 60.5 173 32.4
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 2.5e-07 60.5 54 61.1
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 3.3e-07 60.1 192 30.2
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 3.3e-07 60.1 142 35.2
PGR142G3303 Punica granatum HOM05D001043 ORTHO05D006432 9.7e-07 58.5 136 32.4
TAR636G2727 Trochodendron aralioides HOM05D001043 ORTHO05D006432 9.7e-07 58.5 120 37.5
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 1.3e-06 58.2 190 31.1
CiPaw.02G052200 Carya illinoinensis HOM05D001043 ORTHO05D006432 2.2e-06 57.4 164 31.7
Gorai.005G015800 Gossypium raimondii HOM05D001043 ORTHO05D006432 2.2e-06 57.4 133 33.8
VMungo1127G0978 Vigna mungo HOM05D001043 ORTHO05D006432 2.2e-06 57.4 114 36.8
AUR62023842 Chenopodium quinoa HOM05D001043 ORTHO05D006432 2.8e-06 57.0 186 30.1
Gohir.D02G012400 Gossypium hirsutum HOM05D001043 ORTHO05D006432 2.8e-06 57.0 133 33.8
CiPaw.01G096300 Carya illinoinensis HOM05D001043 ORTHO05D006432 3.7e-06 56.6 101 36.6
Gohir.A02G011600 Gossypium hirsutum HOM05D001043 ORTHO05D006432 4.8e-06 56.2 133 33.8
Medtr4g068130 Medicago truncatula HOM05D001043 ORTHO05D006432 4.8e-06 56.2 193 29.0
Potri.007G130900 Populus trichocarpa HOM05D001043 ORTHO05D006432 4.8e-06 56.2 165 30.9
arahy.Tifrunner.gnm1.ann1.41HRQM Arachis hypogaea HOM05D001043 ORTHO05D006432 6.3e-06 55.8 136 32.4
Hund12412 Selenicereus undatus HOM05D001043 ORTHO05D006432 6.3e-06 55.8 134 29.1


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