Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 3.8e-90 334.7 160 100.0
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.2e-86 323.2 160 97.5
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.8e-85 317.8 160 95.6
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.3e-82 308.9 160 92.5
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.1e-81 306.6 160 91.9
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.1e-81 306.6 160 91.9
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.5e-81 305.4 160 91.2
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 3.3e-81 305.1 160 91.2
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 5.7e-78 294.3 160 88.1
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.1e-76 288.1 160 85.0
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-38 163.3 109 67.0
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.5e-38 163.3 109 67.0
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.0e-38 162.9 109 66.1
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-37 158.7 109 65.1
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 8.4e-37 157.5 109 65.1
CSS0048564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 2.4e-36 156.0 184 46.7
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.8e-24 115.2 135 42.2
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.1e-23 112.5 150 40.0
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 9.0e-23 110.9 135 43.0
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 2.0e-22 109.8 130 40.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 7.6e-22 107.8 133 39.8
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 7.6e-22 107.8 139 38.8
CSS0045174 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 9.9e-22 107.5 109 49.5
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 3.8e-21 105.5 133 39.1
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 6.4e-21 104.8 133 39.1
CSS0050454 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.2e-20 102.1 108 47.2
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 6.0e-19 98.2 133 36.8
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 5.6e-17 91.7 139 36.0
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.1e-16 89.7 66 59.1
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-15 87.0 118 40.7
CSS0019622 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.5e-14 83.6 60 65.0
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-14 83.6 129 34.9
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-14 81.6 136 35.3
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 5.8e-14 81.6 75 52.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-13 80.1 136 34.6
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.2e-13 79.7 65 53.8
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 2.2e-13 79.7 65 53.8
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.9e-13 79.3 67 52.2
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-13 79.0 133 33.8
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-13 79.0 136 34.6
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 1.4e-12 77.0 127 34.6
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 1.4e-12 77.0 127 34.6
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.9e-12 76.6 130 34.6
Rhsim09G0078700 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.9e-12 76.6 68 50.0
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-12 76.3 139 33.8
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.5e-12 76.3 65 52.3
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-12 75.9 136 33.8
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 3.2e-12 75.9 130 34.6
CSS0000617 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.2e-12 75.5 82 48.8
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-12 75.1 132 34.1
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 7.1e-12 74.7 65 52.3
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-12 74.3 129 33.3
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-11 73.9 137 32.8
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.6 70 48.6
Rhsim01G0121300 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.7e-11 72.8 67 47.8
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 137 33.6
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 135 31.9
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 135 32.6
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-11 72.0 136 33.1
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 6.1e-11 71.6 137 32.8
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.1e-11 71.6 129 34.9
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 76 46.1
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 76 46.1
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 76 46.1
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.2 76 46.1
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-10 70.9 133 33.1
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-10 70.1 137 31.4
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-10 69.7 67 44.8
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 137 31.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-10 68.9 69 50.7
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.9e-10 68.9 71 49.3
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 76 44.7
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 69 49.3
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 137 32.1
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.2 69 50.7
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 6.7e-10 68.2 71 43.7
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-09 67.0 133 31.6
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-09 65.9 113 33.6
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-09 65.5 83 37.3
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 5.7e-09 65.1 67 50.7
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 71 46.5
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-09 65.1 131 30.5
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 9.7e-09 64.3 79 39.2
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 1.3e-08 63.9 67 49.3
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 63.9 71 45.1
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 1.3e-08 63.9 69 53.6
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-08 63.2 69 46.4
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-08 62.8 74 45.9
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 3.7e-08 62.4 65 44.6
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-08 62.0 68 45.6
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 6.3e-08 61.6 143 25.9
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.3e-08 61.6 132 30.3
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-07 60.8 113 34.5
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-07 58.9 74 40.5
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-07 58.5 134 27.6
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 5.3e-07 58.5 133 30.1
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 6.9e-07 58.2 61 39.3
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-07 58.2 71 42.3
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-07 57.8 61 39.3
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 9.0e-07 57.8 61 39.3
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-07 57.8 48 52.1
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 1.2e-06 57.4 61 39.3
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 1.5e-06 57.0 61 37.7
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-06 56.6 47 59.6
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-06 56.6 70 41.4
Aqoxy6G02007 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 2.6e-06 56.2 122 28.7
CSS0004167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.6e-06 56.2 109 34.9
CSS0024487 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.6e-06 56.2 109 34.9
CSS0026564 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.6e-06 56.2 109 34.9
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 3.4e-06 55.8 113 31.9
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-06 55.8 70 41.4
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 4.5e-06 55.5 61 39.3
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-06 55.5 47 53.2
CSS0011501 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.9e-06 55.1 109 34.9
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-06 55.1 94 35.1
CSS0006036 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.7e-06 54.7 109 34.9
CSS0030233 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.7e-06 54.7 109 34.9
CSS0048918 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 7.7e-06 54.7 109 34.9
Aqoxy7G02369 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.0e-05 54.3 91 36.3
Aqoxy7G02373 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.0e-05 54.3 91 36.3
CSS0042023 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.0e-05 54.3 109 33.9


User provided reference genes

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