Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 4.0e-159 564.7 280 100.0
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 4.0e-159 564.7 280 100.0
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.6e-136 489.6 279 85.3
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 2.1e-136 489.2 280 84.3
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.3e-133 479.9 280 83.6
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 7.1e-132 474.2 280 83.6
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 6.0e-123 444.5 280 78.2
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 2.5e-121 439.1 271 78.6
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 7.3e-121 437.6 272 79.8
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 9.6e-121 437.2 272 80.9
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 6.2e-120 434.5 280 77.1
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.6e-118 429.1 277 75.1
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 3.4e-118 428.7 284 73.2
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 4.9e-117 424.9 271 77.1
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.9e-116 422.9 277 75.5
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 3.2e-116 422.2 269 75.1
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 7.1e-116 421.0 271 76.4
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 2.1e-115 419.5 275 74.9
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 6.0e-115 417.9 279 72.4
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.3e-113 411.8 271 75.3
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 9.6e-113 410.6 271 75.6
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 9.6e-113 410.6 271 75.6
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.6e-112 409.8 280 73.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 8.1e-112 407.5 283 73.1
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.1e-111 407.1 277 72.6
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.4e-111 406.8 271 73.4
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.8e-111 406.4 266 75.6
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.8e-111 406.4 263 76.8
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 1.8e-111 406.4 280 71.1
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.8e-111 406.4 275 74.2
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 2.4e-111 406.0 273 75.5
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 2.4e-111 406.0 277 72.9
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 4.0e-111 405.2 269 72.9
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.2e-110 403.7 275 73.5
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.2e-110 403.7 272 74.3
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.0e-110 402.9 349 61.9
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 4.5e-110 401.7 272 75.7
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.3e-109 400.2 285 71.2
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.9e-109 399.1 285 70.5
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 3.8e-109 398.7 280 70.4
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.8e-109 398.7 289 69.6
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 3.8e-109 398.7 267 72.3
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 8.4e-109 397.5 280 70.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.4e-108 396.7 282 70.6
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.4e-108 396.7 247 76.1
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.9e-108 396.4 281 70.5
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 5.5e-108 394.8 267 71.5
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 5.5e-108 394.8 282 70.2
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 9.3e-108 394.0 257 75.1
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 2.7e-107 392.5 269 73.2
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.3e-106 390.2 268 70.9
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.8e-106 389.8 253 76.7
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.0e-106 389.0 270 70.0
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 5.1e-106 388.3 261 74.7
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 6.7e-106 387.9 282 69.5
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 6.7e-106 387.9 282 69.5
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.7e-106 387.9 282 72.0
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.7e-106 387.9 282 72.0
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.1e-105 387.1 281 71.2
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 2.5e-105 386.0 270 69.6
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 9.6e-105 384.0 269 71.0
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.3e-104 383.6 270 69.6
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.8e-104 382.5 272 70.2
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 3.7e-104 382.1 282 70.6
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 5.3e-103 378.3 274 69.3
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 6.9e-103 377.9 282 70.2
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.5e-102 376.7 275 67.3
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.0e-102 376.3 260 72.3
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 2.9e-101 372.5 275 66.9
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 5.5e-100 368.2 288 64.9
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.2e-99 367.1 276 71.0
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.2e-99 367.1 260 71.9
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.2e-99 367.1 260 73.1
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 2.1e-99 366.3 258 69.8
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 3.5e-99 365.5 267 68.9
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 4.6e-99 365.2 274 66.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 7.9e-99 364.4 273 64.1
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.3e-98 363.6 287 64.1
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 1.8e-98 363.2 272 66.9
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 6.7e-98 361.3 283 64.3
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 2.5e-97 359.4 258 70.5
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.4e-95 353.6 291 66.3
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 3.1e-95 352.4 275 65.5
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 4.1e-95 352.1 279 65.6
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 9.0e-95 350.9 291 66.7
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 2.6e-94 349.4 274 65.7
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 7.7e-94 347.8 276 63.0
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 5.1e-90 335.1 273 62.3
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.0e-86 323.2 272 62.5
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 2.4e-79 299.7 180 81.1
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.0e-77 294.3 197 74.1
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 2.1e-75 286.6 181 74.6
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 7.4e-73 278.1 173 79.2
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.4e-71 273.9 176 75.0
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.8e-71 273.5 178 72.5
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.0e-70 270.0 271 55.4
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 8.8e-66 254.6 169 71.0
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 9.4e-60 234.6 278 47.5
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.4e-58 230.7 280 46.1
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.4e-57 225.7 157 70.7
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 9.8e-57 224.6 279 47.3
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.3e-56 224.2 172 65.7
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.2e-56 223.4 135 77.8
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.9e-52 210.3 270 45.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 9.8e-49 198.0 277 46.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 8.3e-48 194.9 266 44.7
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.4e-47 193.4 220 47.7
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.2e-40 170.2 277 40.1
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 8.3e-40 168.3 136 64.0
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 4.6e-30 136.0 92 68.5
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.3e-29 134.4 77 77.9
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.3e-29 133.7 78 82.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 1.4e-23 114.4 150 45.3
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 3.2e-23 113.2 76 69.7
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.2e-19 99.0 173 40.5
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 5.8e-17 92.4 76 60.5
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.1e-15 88.2 65 64.6
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 2.1e-14 84.0 82 47.6
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.0e-13 81.6 130 40.8


User provided reference genes

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