Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048505 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 5.7e-104 382.9 195 100.0
CSS0008559 Camellia sinensis var. sinensis HOM05D007551 ORTHO05D009424 4.8e-103 379.8 195 99.0
Dinv37453 Davidia involucrata HOM05D007551 ORTHO05D009424 2.6e-56 224.6 286 48.3
Hma1.2p1_0294F.1_g116420 Hydrangea macrophylla HOM05D007551 ORTHO05D009424 4.0e-49 200.7 291 43.3
Rhsim04G0146500 Rhododendron simsii HOM05D007551 ORTHO05D009424 1.7e-47 195.3 282 45.4
CiPaw.12G053700 Carya illinoinensis HOM05D007551 ORTHO05D009424 3.8e-47 194.1 134 67.9
Prupe.3G018200 Prunus persica HOM05D007551 ORTHO05D009424 8.7e-44 183.0 134 64.9
GSVIVG01036918001 Vitis vinifera HOM05D007551 ORTHO05D009424 1.1e-43 182.6 132 66.7
Cfa012637 Carpinus fangiana HOM05D007551 ORTHO05D009424 4.3e-43 180.6 134 64.9
Solyc11g005940.3 Solanum lycopersicum HOM05D007551 ORTHO05D009424 9.6e-43 179.5 134 66.4
Sopen11g001880 Solanum pennellii HOM05D007551 ORTHO05D009424 1.3e-42 179.1 134 66.4
TAR633G1897 Trochodendron aralioides HOM05D007551 ORTHO05D009424 1.3e-42 179.1 136 64.0
PGSC0003DMG402028683 Solanum tuberosum HOM05D007551 ORTHO05D009424 2.8e-42 177.9 134 66.4
Nitab4.5_0000856g0020 Nicotiana tabacum HOM05D007551 ORTHO05D009424 8.1e-42 176.4 134 64.2
Nitab4.5_0002667g0100 Nicotiana tabacum HOM05D007551 ORTHO05D009424 1.4e-41 175.6 134 64.9
Ciclev10000274m.g Citrus clementina HOM05D007551 ORTHO05D009424 3.1e-41 174.5 135 60.7
Haze_08024 Corylus avellana HOM05D007551 ORTHO05D009424 3.1e-41 174.5 134 62.7
QL11p054679 Quercus lobata HOM05D007551 ORTHO05D009424 4.0e-41 174.1 133 65.4
CAN.G652.9 Capsicum annuum HOM05D007551 ORTHO05D009424 1.5e-40 172.2 133 64.7
FAN13G0867 Fragaria x ananassa HOM05D007551 ORTHO05D009424 2.6e-40 171.4 134 59.0
Atru.chr6.2125 Acer truncatum HOM05D007551 ORTHO05D009424 3.4e-40 171.0 134 63.4
FvH4_5g24430 Fragaria vesca HOM05D007551 ORTHO05D009424 3.4e-40 171.0 134 58.2
Lj8C372G5 Lonicera japonica HOM05D007551 ORTHO05D009424 3.4e-40 171.0 114 70.2
Peaxi162Scf00619g00022 Petunia axillaris HOM05D007551 ORTHO05D009424 3.4e-40 171.0 136 63.2
TAR362G0203 Trochodendron aralioides HOM05D007551 ORTHO05D009424 3.4e-40 171.0 136 63.2
FAN04G0939 Fragaria x ananassa HOM05D007551 ORTHO05D009424 5.8e-40 170.2 221 44.3
MD06G1022200 Malus domestica HOM05D007551 ORTHO05D009424 2.9e-39 167.9 131 62.6
AUR62044750 Chenopodium quinoa HOM05D007551 ORTHO05D009424 4.2e-38 164.1 215 44.2
EL10Ac5g11872 Beta vulgaris HOM05D007551 ORTHO05D009424 9.3e-38 162.9 124 61.3
Nn1g00676 Nelumbo nucifera HOM05D007551 ORTHO05D009424 7.9e-37 159.8 135 60.0
RcHm_v2.0_Chr7g0214821 Rosa chinensis HOM05D007551 ORTHO05D009424 7.9e-37 159.8 133 56.4
Sc07g0008330 Simmondsia chinensis HOM05D007551 ORTHO05D009424 1.0e-36 159.5 136 55.1
ClCG07G011220 Citrullus lanatus HOM05D007551 ORTHO05D009424 2.3e-36 158.3 135 58.5
COL.COLO4_16723 Corchorus olitorius HOM05D007551 ORTHO05D009424 6.7e-36 156.8 136 56.6
FvH4_4g10410 Fragaria vesca HOM05D007551 ORTHO05D009424 6.7e-36 156.8 128 57.0
FvH4_4g10440 Fragaria vesca HOM05D007551 ORTHO05D009424 6.7e-36 156.8 128 57.0
VMungo0251G2062 Vigna mungo HOM05D007551 ORTHO05D009424 6.7e-36 156.8 134 55.2
Eucgr.E01036 Eucalyptus grandis HOM05D007551 ORTHO05D009424 8.7e-36 156.4 143 57.3
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 1.1e-35 156.0 136 56.6
Ah.12g056170 Amaranthus hybridus HOM05D000351 ORTHO05D009424 1.5e-35 155.6 134 59.0
TWI34G0706 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 1.9e-35 155.2 133 59.4
Nn6g33703 Nelumbo nucifera HOM05D007551 ORTHO05D009424 1.6e-34 152.1 134 57.5
RcHm_v2.0_Chr4g0405931 Rosa chinensis HOM05D007551 ORTHO05D009424 2.8e-34 151.4 128 56.2
Cpa.g.sc3.432 Carica papaya HOM05D007551 ORTHO05D009424 3.7e-34 151.0 122 57.4
MELO3C016242.2 Cucumis melo HOM05D007551 ORTHO05D009424 4.8e-34 150.6 134 58.2
CsaV3_4G007030 Cucumis sativus L. HOM05D007551 ORTHO05D009424 8.1e-34 149.8 135 57.0
Oeu040609.1 Olea europaea HOM05D007551 ORTHO05D009424 8.1e-34 149.8 138 56.5
Sed0007434 Sechium edule HOM05D007551 ORTHO05D009424 8.1e-34 149.8 134 57.5
ECA240G1023 Erigeron canadensis HOM05D000046 ORTHO05D000457 1.1e-33 149.4 132 55.3
Gohir.D12G203200 Gossypium hirsutum HOM05D007551 ORTHO05D009424 1.4e-33 149.1 130 55.4
Gohir.A12G200366 Gossypium hirsutum HOM05D007551 ORTHO05D009424 3.1e-33 147.9 130 55.4
Gorai.N026600 Gossypium raimondii HOM05D007551 ORTHO05D009424 3.1e-33 147.9 130 55.4
Phvul.003G277400 Phaseolus vulgaris HOM05D007551 ORTHO05D009424 3.1e-33 147.9 134 53.0
Lalb_Chr09g0334421 Lupinus albus HOM05D007551 ORTHO05D009424 5.3e-33 147.1 130 54.6
Lalb_Chr05g0229381 Lupinus albus HOM05D007551 ORTHO05D009424 9.0e-33 146.4 211 43.1
Oeu029773.2 Olea europaea HOM05D007551 ORTHO05D009424 9.0e-33 146.4 138 56.5
TWI60G1073 Tripterygium wilfordii HOM05D007551 ORTHO05D009424 2.0e-32 145.2 130 59.2
Sed0011000 Sechium edule HOM05D007551 ORTHO05D009424 2.6e-32 144.8 135 54.1
Lsat_1_v5_gn_6_75081 Lactuca sativa HOM05D007551 ORTHO05D009424 3.4e-32 144.4 133 53.4
Cc00_g20060 Coffea canephora HOM05D007551 ORTHO05D009424 6.4e-31 140.2 126 56.3
Glyma.16G058700 Glycine max HOM05D007551 ORTHO05D009424 6.4e-31 140.2 144 49.3
Lj4g0019089 Lotus japonicus HOM05D007551 ORTHO05D009424 1.9e-30 138.7 142 52.1
Carub.0007s2177 Capsella rubella HOM05D007551 ORTHO05D009424 2.5e-30 138.3 134 50.7
AT4G19440 Arabidopsis thaliana HOM05D007551 ORTHO05D009424 4.2e-30 137.5 124 53.2
PGR042G1889 Punica granatum HOM05D007551 ORTHO05D009424 5.5e-30 137.1 124 53.2
Oeu044967.1 Olea europaea HOM05D007551 ORTHO05D009424 9.3e-30 136.3 125 56.0
AL7G34670 Arabidopsis lyrata HOM05D007551 ORTHO05D009424 1.6e-29 135.6 134 50.0
Sp7g18060 Schrenkiella parvula HOM05D007551 ORTHO05D009424 3.5e-29 134.4 129 50.4
MSTRG.1750 Avicennia marina HOM05D007551 ORTHO05D009424 4.6e-29 134.0 103 61.2
Thhalv10024401m.g Eutrema salsugineum HOM05D007551 ORTHO05D009424 4.6e-29 134.0 129 50.4
Migut.E01387 Erythranthe guttata HOM05D007551 ORTHO05D009424 6.0e-29 133.7 137 54.0
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 3.9e-28 131.0 124 50.0
SalBow1G3247 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-27 129.4 125 53.6
SalBow8G4006 Salvia bowleyana HOM05D007551 ORTHO05D009424 1.1e-27 129.4 125 53.6
PSO210G4217 Papaver somniferum HOM05D007551 ORTHO05D009424 3.3e-27 127.9 139 47.5
PSO210G5788 Papaver somniferum HOM05D007551 ORTHO05D009424 1.3e-26 125.9 137 48.2
Aa31LG6G2050 Aethionema arabicum HOM05D007551 ORTHO05D009424 1.6e-26 125.6 130 46.2
BolC3t20473H Brassica oleracea HOM05D007551 ORTHO05D009424 2.8e-26 124.8 112 52.7
SGA_v2.0_scaffold121G33050 Striga asiatica HOM05D007551 ORTHO05D009424 1.1e-25 122.9 146 46.6
C03p81990 Brassica napus HOM05D007551 ORTHO05D009424 1.4e-25 122.5 207 40.6
BcaB03g11619 Brassica carinata HOM05D007551 ORTHO05D009424 1.5e-24 119.0 131 47.3
RcHm_v2.0_Chr7g0219861 Rosa chinensis HOM05D007551 ORTHO05D009424 1.5e-24 119.0 135 44.4
Potri.003G105700 Populus trichocarpa HOM05D007551 ORTHO05D009424 3.4e-24 117.9 91 62.6
Manes.17G006200 Manihot esculenta HOM05D007551 ORTHO05D009424 3.8e-23 114.4 92 63.0
Sabra03G0072700 Salix brachista HOM05D007551 ORTHO05D009424 2.1e-21 108.6 87 62.1
Medtr8g071970 Medicago truncatula HOM05D007551 ORTHO05D009424 3.0e-20 104.8 101 55.4
TPR.G16813 Trifolium pratense HOM05D007551 ORTHO05D009424 1.5e-19 102.4 93 52.7
MD16G1287400 Malus domestica HOM05D007551 ORTHO05D009424 1.3e-18 99.4 70 67.1
Aqoxy2G03897 Aquilegia oxysepala HOM05D007551 ORTHO05D009424 3.7e-18 97.8 91 52.7
SalBow8G0178 Salvia bowleyana HOM05D007551 ORTHO05D009424 2.2e-15 88.6 76 57.9
FAN17G3133 Fragaria x ananassa HOM05D007551 ORTHO05D009424 5.0e-15 87.4 116 39.7
Psat4g109680 Pisum sativum HOM05D007551 ORTHO05D009424 5.0e-15 87.4 80 55.0
Ca_22472_v3 Cicer arietinum L. HOM05D007551 ORTHO05D009424 1.1e-14 86.3 82 52.4
HPP92_013860 Vanilla planifolia HOM05D007551 ORTHO05D009424 3.9e-12 77.8 135 34.1
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 3.3e-11 74.7 107 41.1
HPP92_013845 Vanilla planifolia HOM05D007551 ORTHO05D009424 6.3e-10 70.5 100 37.0
ATR0626G221 Amborella trichopoda HOM05D007551 ORTHO05D009424 5.3e-09 67.4 100 43.0
SalBow7G0144 Salvia bowleyana HOM05D007639 ORTHO05D009509 5.3e-09 67.4 128 35.9
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 5.3e-09 67.4 128 35.9
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 1.5e-08 65.9 131 33.6
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 3.4e-08 64.7 98 38.8
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 5.9e-08 63.9 102 38.2
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 7.7e-08 63.5 105 35.2
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 2.9e-07 61.6 107 36.4
ECA246G4229 Erigeron canadensis HOM05D000587 ORTHO05D009114 2.9e-07 61.6 101 40.6
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 2.9e-07 61.6 107 35.5
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.9e-07 61.6 101 36.6
Duzib213G0999 Durio zibethinus HOM05D007390 ORTHO05D009114 3.8e-07 61.2 101 37.6
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 3.8e-07 61.2 106 34.0
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 5.0e-07 60.8 125 32.8
Nn7g38163 Nelumbo nucifera HOM05D005764 ORTHO05D006600 5.0e-07 60.8 102 37.3
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 6.5e-07 60.5 103 36.9
Cpa.g.c44844 Carica papaya HOM05D007551 ORTHO05D009424 6.5e-07 60.5 64 46.9
Lsat_1_v5_gn_6_101541 Lactuca sativa HOM05D007390 ORTHO05D009114 6.5e-07 60.5 101 39.6
Potri.014G056400 Populus trichocarpa HOM05D000104 ORTHO05D009920 1.1e-06 59.7 128 33.6
QL04p014212 Quercus lobata HOM05D007455 ORTHO05D009431 1.4e-06 59.3 102 34.3
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 1.4e-06 59.3 123 31.7
Potri.001G276500 Populus trichocarpa HOM05D007455 ORTHO05D009431 2.5e-06 58.5 98 35.7
Sc16g0011110 Simmondsia chinensis HOM05D007455 ORTHO05D009431 2.5e-06 58.5 112 33.9
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 2.5e-06 58.5 157 31.8
CARHR226230 Cardamine hirsuta HOM05D007551 ORTHO05D009424 3.2e-06 58.2 127 33.1
TAR362G1049 Trochodendron aralioides HOM05D005764 ORTHO05D006600 3.2e-06 58.2 100 35.0
GSVIVG01030107001 Vitis vinifera HOM05D005764 ORTHO05D006600 3.2e-06 58.2 98 38.8
Peaxi162Scf01229g00021 Petunia axillaris HOM05D007455 ORTHO05D009431 4.2e-06 57.8 88 37.5
CDE04G3788 Ceratophyllum demersum HOM05D007639 ORTHO05D009509 5.5e-06 57.4 109 33.9
Sabra16G0170400 Salix brachista HOM05D007455 ORTHO05D009431 5.5e-06 57.4 98 34.7
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 7.2e-06 57.0 101 33.7
Sp6g17720 Schrenkiella parvula HOM05D007390 ORTHO05D009114 7.2e-06 57.0 101 36.6
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 7.2e-06 57.0 109 33.9
Zm00001eb151970 Zea mays HOM05D059268 ORTHO05D009424 7.2e-06 57.0 104 31.7


User provided reference genes

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