Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 3.5e-152 541.6 274 100.0
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 9.0e-55 218.0 253 49.0
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.7e-53 213.8 245 46.1
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 1.1e-52 211.1 255 48.6
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 4.6e-51 205.7 250 42.8
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 1.7e-50 203.8 248 45.6
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 2.3e-50 203.4 249 46.2
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.0e-50 203.0 253 44.7
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 5.1e-50 202.2 237 47.3
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 2.5e-49 199.9 192 54.7
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 7.3e-49 198.4 224 50.0
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 2.1e-48 196.8 246 46.3
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 2.8e-48 196.4 246 47.2
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 4.8e-48 195.7 226 48.2
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 5.8e-46 188.7 212 49.5
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 7.6e-46 188.3 240 45.8
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 1.7e-45 187.2 231 45.9
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 3.8e-45 186.0 227 49.3
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 6.4e-45 185.3 250 44.4
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.4e-44 184.1 239 44.4
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 5.4e-44 182.2 256 44.1
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 7.1e-44 181.8 212 48.6
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 9.3e-44 181.4 301 38.5
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 9.3e-44 181.4 206 49.5
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 2.3e-42 176.8 251 41.8
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 3.0e-42 176.4 262 42.4
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 5.1e-42 175.6 257 42.0
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.1e-41 174.5 206 47.6
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.5e-41 174.1 208 47.1
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 1.5e-41 174.1 280 40.4
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 2.5e-41 173.3 228 45.6
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 3.3e-41 172.9 222 45.9
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.3e-40 171.0 202 47.0
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 1.6e-40 170.6 263 40.3
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 2.8e-40 169.9 260 40.0
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 3.7e-40 169.5 259 40.2
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 1.4e-39 167.5 205 44.4
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.4e-39 166.8 247 41.7
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 3.1e-39 166.4 222 43.2
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.0e-39 166.0 247 41.7
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 5.3e-39 165.6 247 41.7
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 1.5e-38 164.1 190 50.5
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 5.8e-38 162.2 286 37.4
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 1.3e-37 161.0 219 44.3
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 1.3e-37 161.0 219 44.3
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 2.9e-37 159.8 263 39.2
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.1e-36 157.9 196 47.4
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 5.5e-36 155.6 253 39.1
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.6e-35 154.1 201 43.3
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 6.0e-35 152.1 207 45.4
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 1.8e-34 150.6 230 42.2
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 8.7e-34 148.3 246 37.8
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 8.7e-34 148.3 206 39.8
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 4.3e-33 146.0 207 43.5
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 4.3e-33 146.0 141 56.0
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 9.6e-33 144.8 156 53.2
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.3e-32 144.4 188 45.7
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 1.3e-32 144.4 188 45.2
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.3e-32 144.4 202 42.6
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 4.8e-32 142.5 127 58.3
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 3.1e-31 139.8 147 52.4
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.0e-30 137.1 194 41.2
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 4.9e-29 132.5 216 39.8
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 5.5e-28 129.0 127 53.5
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.3e-26 124.4 253 35.2
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 9.7e-25 118.2 135 49.6
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.6e-24 117.5 260 34.2
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 2.4e-23 113.6 195 40.0
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 2.4e-23 113.6 194 41.2
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 5.9e-22 109.0 130 47.7
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 7.6e-22 108.6 146 45.2
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 1.7e-21 107.5 235 35.7
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.9e-20 104.0 197 40.6
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 5.5e-20 102.4 341 29.0
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 7.9e-19 98.6 145 39.3
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 8.8e-18 95.1 184 38.0
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 4.3e-17 92.8 102 48.0
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.8e-16 90.1 103 51.5
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.8e-16 90.1 218 35.3
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 2.4e-15 87.0 241 29.0
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 7.2e-12 75.5 108 43.5
QL05p058149 Quercus lobata HOM05D008587 ORTHO05D010485 2.1e-11 73.9 148 35.8
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 2.6e-09 67.0 109 38.5
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 3.3e-09 66.6 102 43.1
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 9.7e-09 65.1 118 36.4
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 2.2e-08 63.9 113 37.2
Prupe.4G080600 Prunus persica HOM05D008587 ORTHO05D010485 2.2e-08 63.9 122 33.6
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 2.8e-08 63.5 117 37.6
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 1.4e-07 61.2 103 37.9
Cfa000946 Carpinus fangiana HOM05D008587 ORTHO05D010485 4.1e-07 59.7 99 40.4
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 5.3e-07 59.3 119 37.8
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 5.3e-07 59.3 103 39.8
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 4.5e-06 56.2 92 39.1
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 4.5e-06 56.2 92 39.1
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 4.5e-06 56.2 92 39.1
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 5.9e-06 55.8 92 39.1
TWI73G0974 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 5.9e-06 55.8 99 34.3
A05p11130 Brassica napus HOM05D008587 ORTHO05D010485 7.7e-06 55.5 92 39.1
BraA05t20060Z Brassica rapa HOM05D008587 ORTHO05D010485 7.7e-06 55.5 92 39.1


User provided reference genes

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