Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048480 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 2.2e-38 162.5 136 100.0
CSS0038738 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.1e-37 160.2 136 99.3
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 4.7e-12 75.1 57 75.4
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 6.1e-12 74.7 67 61.2
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.9e-11 72.0 54 63.0
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.5e-10 70.1 66 57.6
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.2e-09 66.2 69 50.7
TAR376G0192 Trochodendron aralioides HOM05D004728 ORTHO05D002375 1.1e-08 63.9 67 49.3
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.8e-08 63.2 70 51.4
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 4.1e-08 62.0 51 56.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.3e-08 61.6 69 46.4
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.0e-08 61.2 78 50.0
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.0e-08 61.2 67 52.2
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 9.1e-08 60.8 65 50.8
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 9.1e-08 60.8 47 70.2
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.0e-07 59.7 51 56.9
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 2.0e-07 59.7 68 44.1
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 3.4e-07 58.9 52 55.8
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 4.5e-07 58.5 65 46.2
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 5.9e-07 58.2 51 54.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.9e-07 58.2 51 54.9
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.9e-07 58.2 51 54.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 7.7e-07 57.8 53 52.8
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.0e-06 57.4 51 52.9
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.0e-06 57.4 51 52.9
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 1.7e-06 56.6 70 51.4
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.7e-06 56.6 70 45.7
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.7e-06 56.6 44 63.6
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 3.8e-06 55.5 69 40.6
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 3.8e-06 55.5 51 54.9
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 5.0e-06 55.1 73 41.1
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.0e-06 55.1 51 51.0
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.0e-06 55.1 51 51.0
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 5.0e-06 55.1 53 50.9
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 6.5e-06 54.7 67 43.3
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 8.5e-06 54.3 51 49.0


User provided reference genes

Program Settings