Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-66 255.8 135 100.0
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.1e-61 240.0 135 95.6
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-60 235.7 134 93.3
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.3e-59 233.0 135 91.9
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.2e-57 226.5 135 89.6
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.1e-57 225.7 131 90.8
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.6e-57 224.9 135 91.1
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.7e-57 224.6 135 91.1
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.8e-56 220.7 133 88.0
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-52 209.1 135 86.7
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 6.4e-14 81.3 98 42.9
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 5.5e-13 78.2 94 47.9
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 5.5e-13 78.2 94 51.1
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.2e-12 77.0 107 43.0
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 6.0e-12 74.7 102 40.2
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 1.3e-11 73.6 109 41.3
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 1.3e-11 73.6 93 43.0
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.0e-11 72.4 74 51.4
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.1e-11 71.6 77 48.1
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 6.7e-11 71.2 104 42.3
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.1e-10 70.5 93 40.9
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 7.4e-10 67.8 110 41.8
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 9.6e-10 67.4 110 40.9
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 9.6e-10 67.4 99 40.4
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.6e-09 66.6 80 43.8
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.6e-09 66.6 128 35.2
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 1.6e-09 66.6 113 36.3
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 2.1e-09 66.2 98 44.9
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 2.8e-09 65.9 94 43.6
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.8e-09 65.1 97 37.1
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.8e-09 65.1 81 43.2
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 6.2e-09 64.7 103 35.0
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 1.4e-08 63.5 89 38.2
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 1.4e-08 63.5 98 37.8
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.8e-08 63.2 96 38.5
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 2.4e-08 62.8 98 35.7
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 5.3e-08 61.6 102 37.3
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 6.9e-08 61.2 102 37.3
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 6.9e-08 61.2 119 38.7
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 9.0e-08 60.8 85 40.0
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.0e-08 60.8 75 45.3
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.0e-07 59.7 114 38.6
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.0e-07 59.7 97 36.1
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.6e-07 59.3 120 37.5
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.6e-07 59.3 113 38.1
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.6e-07 59.3 125 36.0
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 3.4e-07 58.9 117 35.0
Prupe.1G297700 Prunus persica HOM05D008138 ORTHO05D010043 4.5e-07 58.5 97 38.1
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 7.6e-07 57.8 98 35.7
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.0e-06 57.4 117 35.0
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.0e-06 57.4 96 37.5
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.3e-06 57.0 97 38.1
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.2e-06 56.2 90 40.0
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 2.2e-06 56.2 98 33.7
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 2.9e-06 55.8 110 35.5
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.8e-06 55.5 127 32.3
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.8e-06 55.5 127 32.3
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 4.9e-06 55.1 92 41.3
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 4.9e-06 55.1 103 36.9


User provided reference genes

Program Settings