Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.3e-176 622.9 304 100.0
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 3.3e-135 485.3 297 78.1
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 3.8e-131 471.9 305 73.4
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 3.8e-131 471.9 307 75.9
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 3.2e-130 468.8 304 73.7
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.2e-129 466.8 306 72.9
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.4e-128 463.4 310 72.6
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 5.7e-127 458.0 287 76.7
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.6e-124 449.1 306 71.2
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.1e-122 443.7 306 70.9
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 5.5e-122 441.4 293 73.7
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 5.5e-122 441.4 305 69.2
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 1.2e-121 440.3 296 70.6
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 1.6e-121 439.9 306 69.9
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 1.0e-120 437.2 306 69.9
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 1.4e-120 436.8 312 67.0
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 4.0e-120 435.3 303 69.6
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 6.8e-120 434.5 294 71.1
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 1.2e-119 433.7 303 69.3
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 2.0e-119 433.0 304 69.1
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 5.7e-119 431.4 308 70.8
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.3e-118 430.3 307 66.8
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 4.8e-118 428.3 307 70.4
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 4.8e-118 428.3 310 66.5
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 4.8e-118 428.3 305 69.8
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 6.3e-118 427.9 305 67.2
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 4.1e-117 425.2 299 69.9
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 7.0e-117 424.5 304 69.1
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 3.5e-116 422.2 304 68.1
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 7.7e-116 421.0 306 68.3
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 3.8e-115 418.7 307 68.4
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 6.5e-115 417.9 304 68.1
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 6.5e-115 417.9 291 70.4
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.1e-114 417.2 311 68.5
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.5e-114 416.8 306 68.0
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 2.5e-114 416.0 299 68.6
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 3.2e-114 415.6 304 67.4
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 7.2e-114 414.5 296 67.9
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 7.2e-114 414.5 312 66.0
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 7.2e-114 414.5 308 67.2
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 9.4e-114 414.1 313 66.1
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 4.7e-113 411.8 302 66.2
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.8e-112 409.8 301 68.1
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.2e-111 407.1 294 67.7
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 2.6e-111 406.0 306 66.7
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 2.6e-111 406.0 307 66.1
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 3.4e-111 405.6 296 65.9
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 7.5e-111 404.4 339 60.8
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 1.4e-109 400.2 305 66.2
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 1.8e-109 399.8 294 66.3
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 7.0e-109 397.9 295 66.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 1.2e-108 397.1 294 65.3
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 2.0e-108 396.4 305 63.0
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 2.0e-108 396.4 293 65.5
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 3.5e-108 395.6 294 66.0
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 5.9e-108 394.8 294 66.0
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 4.2e-106 388.7 287 64.8
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 1.2e-105 387.1 301 65.8
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 2.2e-102 376.3 293 63.1
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 6.3e-102 374.8 286 64.7
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 8.3e-102 374.4 286 64.7
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 2.4e-101 372.9 303 59.7
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.0e-99 367.5 304 59.9
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 3.9e-99 365.5 275 64.4
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 6.6e-99 364.8 295 60.3
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 8.0e-97 357.8 334 56.6
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.3e-96 356.3 245 68.2
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 2.2e-94 349.7 315 56.2
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 4.9e-94 348.6 308 56.5
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.3e-90 335.9 297 57.2
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 5.8e-87 325.1 217 70.5
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 5.4e-77 292.0 224 62.9
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.6e-73 280.4 319 51.4
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.2e-71 274.2 294 51.7
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 5.4e-69 265.4 326 48.2
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 9.3e-69 264.6 326 46.6
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 1.5e-66 257.3 171 70.8
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.3e-66 255.8 223 56.1
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 4.3e-66 255.8 229 57.6
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 3.6e-65 252.7 315 45.1
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 3.6e-65 252.7 339 43.4
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.4e-61 240.7 261 50.2
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 6.0e-52 208.8 168 60.1
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 2.5e-50 203.4 141 69.5
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 7.6e-47 191.8 186 53.8
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 2.5e-45 186.8 291 39.2
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 5.1e-43 179.1 115 73.9
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.4e-37 161.0 130 65.4
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 2.2e-33 147.1 123 61.0
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 1.0e-27 128.3 93 62.4
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.9e-22 110.2 78 66.7
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.4e-21 107.8 131 45.8
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.4e-21 107.8 131 45.8
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 3.9e-19 99.8 87 55.2
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.7e-15 85.5 90 52.2
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 2.5e-13 80.5 62 67.7
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.1e-10 71.6 63 58.7
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 2.7e-07 60.5 60 55.0
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.5e-07 60.1 60 56.7


User provided reference genes

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