Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048421 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D111325 3.7e-38 161.0 79 100.0
CSS0013881 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D109850 1.1e-37 159.5 79 98.7
CSS0020499 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D109813 3.5e-28 127.9 79 81.0
CSS0004400 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D113399 7.8e-28 126.7 79 81.0
CSS0036800 Camellia sinensis var. sinensis HOM05D022417 ORTHO05D110288 1.3e-27 125.9 79 79.7
CSS0001432 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 1.7e-06 55.8 30 80.0
Actinidia07473 Actinidia chinensis HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 80.0
Lj1g0018032 Lotus japonicus HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 80.0
Lalb_Chr08g0246561 Lupinus albus HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 80.0
Lalb_Chr23g0265471 Lupinus albus HOM05D003089 ORTHO05D003544 3.8e-06 54.7 30 80.0
SGA_v2.0_scaffold32G13157 Striga asiatica HOM05D003089 ORTHO05D003544 4.9e-06 54.3 30 80.0
FvH4_2g08470 Fragaria vesca HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 76.7
FAN24G1972 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 76.7
FAN24G2674 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.4e-06 53.9 30 76.7
arahy.Tifrunner.gnm1.ann1.AHB8GW Arachis hypogaea HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 80.0
arahy.Tifrunner.gnm1.ann1.U64SVT Arachis hypogaea HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 80.0
Glyma.04G013900 Glycine max HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 76.7
Glyma.06G013800 Glycine max HOM05D003089 ORTHO05D003544 8.4e-06 53.5 30 76.7


User provided reference genes

Program Settings