Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 4.8e-59 231.1 130 100.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.2e-38 163.3 128 74.2
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.5e-36 156.4 133 71.4
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.4e-36 155.2 128 70.3
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 4.4e-36 154.8 130 69.2
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 2.4e-34 149.1 131 66.4
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 2.1e-33 146.0 128 64.1
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.3e-32 142.5 129 62.8
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 3.0e-32 142.1 128 62.5
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.1e-31 140.2 88 83.0
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 2.8e-30 135.6 132 59.1
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 3.6e-30 135.2 129 60.5
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 8.1e-30 134.0 130 60.8
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.4e-29 133.3 130 59.2
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.8e-29 132.9 132 59.8
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 1.8e-29 132.9 129 58.9
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.3e-29 132.5 128 59.4
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 2.3e-29 132.5 140 58.6
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 5.2e-29 131.3 128 58.6
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 5.2e-29 131.3 128 57.8
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 6.8e-29 131.0 128 57.8
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 8.9e-29 130.6 125 65.6
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.2e-28 130.2 135 62.2
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 2.0e-28 129.4 86 77.9
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 4.4e-28 128.3 128 59.4
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 5.8e-28 127.9 128 63.3
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 5.8e-28 127.9 128 63.3
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 7.5e-28 127.5 128 57.0
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 7.5e-28 127.5 100 68.0
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 9.9e-28 127.1 86 76.7
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 9.9e-28 127.1 89 73.0
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 1.3e-27 126.7 131 58.8
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.7e-27 126.3 128 55.5
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.7e-27 126.3 136 56.6
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 2.2e-27 125.9 89 71.9
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 2.9e-27 125.6 129 58.1
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.9e-27 125.6 140 58.6
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.7e-27 125.2 89 75.3
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 4.9e-27 124.8 138 55.8
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 4.9e-27 124.8 174 47.1
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 6.4e-27 124.4 131 53.4
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 8.3e-27 124.0 90 72.2
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.1e-26 123.6 131 53.4
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 2.4e-26 122.5 93 71.0
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.4e-26 122.5 92 72.8
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.4e-26 122.5 140 53.6
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 3.2e-26 122.1 128 57.0
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 4.1e-26 121.7 129 57.4
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.1e-26 121.7 132 55.3
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 4.1e-26 121.7 131 55.0
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 4.1e-26 121.7 132 55.3
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 5.4e-26 121.3 133 56.4
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 7.1e-26 120.9 129 57.4
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 7.1e-26 120.9 144 51.4
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 7.1e-26 120.9 129 58.1
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 9.2e-26 120.6 129 59.7
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.2e-25 120.2 128 55.5
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 2.1e-25 119.4 128 56.2
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 2.1e-25 119.4 95 71.6
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 2.1e-25 119.4 131 58.0
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 3.5e-25 118.6 135 57.0
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 4.6e-25 118.2 132 59.1
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 1.3e-24 116.7 131 55.0
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.7e-24 116.3 93 68.8
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.7e-24 116.3 93 68.8
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 2.3e-24 115.9 91 70.3
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 3.0e-24 115.5 131 55.7
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 6.6e-24 114.4 92 67.4
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.9e-23 112.8 92 65.2
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.9e-23 112.8 132 53.0
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 1.9e-23 112.8 130 56.2
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 3.3e-23 112.1 73 76.7
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 7.3e-23 110.9 93 64.5
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 3.6e-22 108.6 122 51.6
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 1.4e-21 106.7 129 54.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 1.4e-21 106.7 129 52.7
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 1.4e-21 106.7 129 52.7
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 1.8e-21 106.3 132 56.8
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.4e-21 105.9 129 52.7
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 3.1e-21 105.5 129 51.9
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.0e-20 102.8 60 83.3
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 2.0e-20 102.8 59 83.1
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.4e-20 101.7 129 55.0
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 9.9e-20 100.5 70 75.7
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.3e-19 100.1 89 61.8
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.7e-19 99.8 130 53.1
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 2.2e-19 99.4 67 74.6
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 1.6e-17 93.2 63 74.6
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.7e-17 92.4 76 63.2
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 3.5e-17 92.0 58 81.0
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 4.6e-17 91.7 158 44.3
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 1.5e-15 86.7 83 59.0
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 5.3e-13 78.2 66 57.6
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 9.9e-12 73.9 79 46.8
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.7e-11 73.2 46 78.3
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 5.4e-10 68.2 84 52.4
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 1.2e-09 67.0 63 55.6
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 1.6e-06 56.6 75 42.7
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.8e-06 55.8 81 48.1
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 6.2e-06 54.7 85 41.2


User provided reference genes

Program Settings