Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.7e-48 194.9 92 100.0
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.7e-48 194.9 92 100.0
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 4.1e-28 127.9 79 78.5
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 3.5e-27 124.8 79 75.9
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 4.5e-27 124.4 79 74.7
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 4.5e-27 124.4 79 74.7
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 4.5e-27 124.4 65 84.6
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 7.7e-27 123.6 79 75.9
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 1.0e-26 123.2 79 74.7
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 1.3e-26 122.9 79 73.4
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 1.7e-26 122.5 69 78.3
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 2.2e-26 122.1 79 73.4
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 3.8e-26 121.3 79 73.4
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 3.8e-26 121.3 79 73.4
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 3.8e-26 121.3 79 74.7
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 5.0e-26 120.9 89 67.4
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 5.0e-26 120.9 79 73.4
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.1e-25 119.8 79 72.2
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 1.5e-25 119.4 79 72.2
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 2.5e-25 118.6 79 69.6
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 3.2e-25 118.2 79 72.2
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 3.2e-25 118.2 79 69.6
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 3.2e-25 118.2 79 68.4
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 4.2e-25 117.9 79 70.9
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 5.5e-25 117.5 79 68.4
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 7.2e-25 117.1 79 69.6
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 9.4e-25 116.7 78 71.8
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 9.4e-25 116.7 79 69.6
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 1.2e-24 116.3 79 70.9
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 1.6e-24 115.9 79 70.9
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 2.7e-24 115.2 79 69.6
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 2.7e-24 115.2 79 68.4
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 4.7e-24 114.4 79 69.6
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 6.1e-24 114.0 77 68.8
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 8.0e-24 113.6 79 69.6
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 8.0e-24 113.6 79 67.1
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 8.0e-24 113.6 79 67.1
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.0e-23 113.2 77 71.4
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 1.0e-23 113.2 79 69.6
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 1.4e-23 112.8 79 68.4
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 1.8e-23 112.5 98 58.2
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 2.3e-23 112.1 97 58.8
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 2.3e-23 112.1 104 55.8
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 3.0e-23 111.7 79 68.4
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 4.0e-23 111.3 79 68.4
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 6.8e-23 110.5 94 58.5
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 6.8e-23 110.5 79 67.1
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 6.8e-23 110.5 79 64.6
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 6.8e-23 110.5 79 67.1
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 8.8e-23 110.2 79 65.8
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 8.8e-23 110.2 79 65.8
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 1.2e-22 109.8 79 67.1
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 1.2e-22 109.8 79 64.6
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 1.5e-22 109.4 79 67.1
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 1.5e-22 109.4 78 66.7
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 1.5e-22 109.4 75 68.0
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 2.0e-22 109.0 79 65.8
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 2.0e-22 109.0 79 67.1
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 2.0e-22 109.0 79 67.1
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 2.6e-22 108.6 79 64.6
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 2.6e-22 108.6 79 64.6
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 2.6e-22 108.6 79 65.8
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 3.4e-22 108.2 103 56.3
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 3.4e-22 108.2 65 75.4
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 4.4e-22 107.8 79 64.6
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 5.7e-22 107.5 79 62.0
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 5.7e-22 107.5 79 67.1
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 7.5e-22 107.1 79 63.3
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 9.8e-22 106.7 79 62.0
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 9.8e-22 106.7 79 62.0
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.7e-21 105.9 79 64.6
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 2.2e-21 105.5 77 64.9
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 2.8e-21 105.1 79 63.3
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 2.8e-21 105.1 79 63.3
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 6.3e-21 104.0 79 59.5
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 6.3e-21 104.0 77 63.6
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 8.3e-21 103.6 79 62.0
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 8.3e-21 103.6 79 63.3
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 1.1e-20 103.2 77 63.6
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 3.1e-20 101.7 49 93.9
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 4.1e-20 101.3 77 63.6
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 4.1e-20 101.3 79 62.0
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 5.4e-20 100.9 49 91.8
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.2e-19 99.8 77 62.3
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 1.2e-19 99.8 50 92.0
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 1.2e-19 99.8 77 62.3
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 1.2e-19 99.8 77 61.0
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 1.6e-19 99.4 79 60.8
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.6e-19 99.4 101 56.4
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 2.0e-19 99.0 50 88.0
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 3.5e-19 98.2 77 61.0
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 5.9e-19 97.4 77 61.0
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 5.9e-19 97.4 77 61.0
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 5.9e-19 97.4 77 61.0
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 1.0e-18 96.7 108 47.2
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 2.2e-18 95.5 75 61.3
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 6.5e-18 94.0 75 60.0
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 6.5e-18 94.0 75 60.0
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 6.5e-18 94.0 75 60.0
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 6.5e-18 94.0 49 83.7
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 8.5e-18 93.6 58 72.4
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 1.1e-17 93.2 50 84.0
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 9.5e-17 90.1 50 78.0
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 9.5e-17 90.1 50 78.0
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 1.2e-16 89.7 75 58.7
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 4.7e-16 87.8 48 81.2
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 1.8e-15 85.9 75 56.0
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 1.7e-13 79.3 93 44.1
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 2.3e-10 68.9 47 63.8
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 5.0e-10 67.8 62 58.1
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 1.9e-09 65.9 63 60.3
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 4.3e-09 64.7 59 54.2
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 6.1e-08 60.8 57 54.4
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 5.2e-07 57.8 56 53.6
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 5.2e-07 57.8 56 53.6


User provided reference genes

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