Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048379 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 5.4e-31 137.1 74 100.0
CSS0038042 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 8.7e-29 129.8 74 93.2
CSS0002904 Camellia sinensis var. sinensis HOM05D034440 ORTHO05D033860 3.8e-24 114.4 75 85.3
Rhsim07G0077900 Rhododendron simsii HOM05D000183 ORTHO05D000100 4.3e-12 74.3 69 59.4
vmacro13850 Vaccinium macrocarpon HOM05D000183 ORTHO05D000100 4.8e-11 70.9 73 56.2
Peaxi162Scf00074g00025 Petunia axillaris HOM05D000183 ORTHO05D000100 6.5e-08 60.5 58 58.6
Gohir.A12G240300 Gossypium hirsutum HOM05D000183 ORTHO05D000100 2.5e-07 58.5 76 51.3
Gohir.D12G241600 Gossypium hirsutum HOM05D000183 ORTHO05D000100 2.5e-07 58.5 76 52.6
Gorai.008G258900 Gossypium raimondii HOM05D000183 ORTHO05D000100 2.5e-07 58.5 76 52.6
Actinidia22208 Actinidia chinensis HOM05D000183 ORTHO05D000100 9.3e-07 56.6 70 51.4
Nitab4.5_0004251g0010 Nicotiana tabacum HOM05D000183 ORTHO05D000100 9.3e-07 56.6 65 50.8
Nitab4.5_0007001g0020 Nicotiana tabacum HOM05D000183 ORTHO05D000100 9.3e-07 56.6 65 50.8
Cc08_g16780 Coffea canephora HOM05D000183 ORTHO05D000100 2.7e-06 55.1 62 50.0
Duzib205G0556 Durio zibethinus HOM05D000183 ORTHO05D000100 2.7e-06 55.1 63 49.2
CiPaw.11G111900 Carya illinoinensis HOM05D000183 ORTHO05D000100 6.0e-06 53.9 38 73.7
CAN.G567.90 Capsicum annuum HOM05D000183 ORTHO05D000100 7.9e-06 53.5 44 63.6


User provided reference genes

Program Settings