Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048374 Camellia sinensis var. sinensis HOM05D048559 ORTHO05D007424 5.2e-30 134.4 110 100.0
CSS0023797 Camellia sinensis var. sinensis HOM05D048559 ORTHO05D007424 3.5e-18 95.1 45 100.0
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 3.5e-10 68.6 94 63.8
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 2.5e-08 62.4 94 60.6
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 3.3e-08 62.0 94 45.7
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 7.3e-08 60.8 106 50.0
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 7.3e-08 60.8 108 48.1
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 1.3e-07 60.1 34 85.3
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 1.6e-07 59.7 48 64.6
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 2.8e-07 58.9 60 55.0
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 1.1e-06 57.0 93 50.5
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 1.4e-06 56.6 47 63.8
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 1.8e-06 56.2 92 53.3
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 1.8e-06 56.2 46 65.2
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 2.4e-06 55.8 61 52.5
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 3.1e-06 55.5 43 67.4
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 5.3e-06 54.7 34 82.4
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 5.3e-06 54.7 46 65.2
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 5.3e-06 54.7 47 61.7
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 6.9e-06 54.3 94 60.6
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 6.9e-06 54.3 46 60.9
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 9.0e-06 53.9 29 93.1
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 9.0e-06 53.9 94 55.3


User provided reference genes

Program Settings