Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.2e-85 318.9 160 100.0
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.3e-49 197.6 160 69.4
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.5e-49 197.2 160 68.1
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.5e-49 197.2 160 69.4
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.6e-41 170.6 160 63.1
CSS0016507 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.5e-30 135.2 160 48.8
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.6e-30 134.4 158 47.5
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.4e-23 112.8 159 42.1
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-19 100.5 161 37.3
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-17 94.0 158 38.0
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-17 94.0 155 37.4
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-17 92.8 89 50.6
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.1e-15 85.9 158 35.4
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.5e-14 82.0 155 37.4
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.6e-14 81.3 154 37.7
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.6e-14 81.3 161 31.7
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.0e-13 80.9 154 33.8
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.0e-13 80.9 154 35.1
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.3e-13 80.5 86 40.7
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.7e-13 80.1 161 33.5
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.2e-13 79.7 161 33.5
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.8e-13 79.0 161 32.9
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 4.9e-13 78.6 153 36.6
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.9e-12 76.6 164 33.5
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.9e-12 76.6 158 33.5
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 3.2e-12 75.9 145 35.9
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 4.2e-12 75.5 88 36.4
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.1e-12 74.7 158 31.6
CSS0048899 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-11 73.9 156 32.1
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.7e-11 72.8 155 31.6
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.5e-11 72.4 87 41.4
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.5e-11 72.4 159 34.6
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 4.6e-11 72.0 159 33.3
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.6e-11 72.0 160 35.0
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 7.9e-11 71.2 145 34.5
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 1.0e-10 70.9 149 36.9
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.3e-10 70.5 87 41.4
CSS0041363 Camellia sinensis var. sinensis HOM05D001340 ORTHO05D002318 1.3e-10 70.5 126 34.9
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.8e-10 70.1 156 32.7
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.8e-10 70.1 156 32.7
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 5.1e-10 68.6 128 34.4
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 5.1e-10 68.6 134 33.6
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.7e-10 67.8 108 37.0
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 8.7e-10 67.8 149 32.9
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 8.7e-10 67.8 142 32.4
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.5e-09 66.2 86 39.5
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-08 63.9 155 31.0
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 1.3e-08 63.9 85 41.2
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.6e-08 63.5 136 31.6
CSS0006002 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-08 63.2 76 38.2
CSS0034453 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.8e-08 62.8 152 29.6
Rhsim12G0201300 Rhododendron simsii HOM05D002908 ORTHO05D009379 4.8e-08 62.0 78 43.6
COL.COLO4_30449 Corchorus olitorius HOM05D001332 ORTHO05D007191 6.3e-08 61.6 159 27.7
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.1e-07 60.8 140 35.0
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 1.1e-07 60.8 106 36.8
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-07 60.1 153 29.4
COL.COLO4_36554 Corchorus olitorius HOM05D000003 ORTHO05D015627 2.4e-07 59.7 75 38.7
COL.COLO4_35386 Corchorus olitorius HOM05D008133 ORTHO05D009449 3.1e-07 59.3 152 29.6
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.3e-07 58.5 86 36.0
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 1.2e-06 57.4 85 37.6
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.0e-06 56.6 111 34.2
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 2.0e-06 56.6 156 29.5
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 2.0e-06 56.6 99 40.4
CSS0013596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.6e-06 56.2 43 62.8
CSS0034752 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 2.6e-06 56.2 157 28.0
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.6e-06 56.2 106 33.0
FvH4_1g29601 Fragaria vesca HOM05D000003 ORTHO05D000004 2.6e-06 56.2 161 26.7
COL.COLO4_35238 Corchorus olitorius HOM05D008133 ORTHO05D009449 3.4e-06 55.8 156 26.9
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.5e-06 55.5 75 33.3
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 4.5e-06 55.5 67 44.8
Lj3C625T2 Lonicera japonica HOM05D008183 ORTHO05D007254 7.7e-06 54.7 84 34.5
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 7.7e-06 54.7 85 35.3
Sc20g0000530 Simmondsia chinensis HOM05D013236 ORTHO05D007254 7.7e-06 54.7 74 41.9


User provided reference genes

Program Settings