Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048369 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.5e-200 702.6 333 100.0
CSS0047785 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.7e-119 432.2 346 64.7
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.6e-66 257.3 339 41.0
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 5.8e-64 248.8 330 41.8
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.9e-63 245.7 330 40.9
CSS0034277 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.2e-62 243.0 330 41.5
CSS0027262 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.4e-57 227.6 329 40.4
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 6.0e-45 185.7 254 37.4
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.8e-45 185.3 300 38.7
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.0e-44 184.9 254 37.0
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 4.7e-42 176.0 254 35.4
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 4.3e-35 152.9 243 31.3
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.6e-34 149.8 282 29.4
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 6.2e-34 149.1 305 32.1
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.0e-33 146.4 252 31.3
TWI63G0295 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 5.3e-33 146.0 275 31.3
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.6e-32 142.1 266 32.0
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 7.6e-32 142.1 297 29.6
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.3e-31 141.4 277 29.2
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 1.1e-30 138.3 238 31.5
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-30 137.9 226 32.7
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-30 137.1 219 33.3
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-30 136.3 245 30.2
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-30 136.0 219 33.3
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-30 136.0 219 33.3
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-30 135.6 245 30.2
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.2e-29 134.8 254 31.5
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-29 134.4 219 32.9
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.1e-29 134.0 254 31.5
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.7e-29 133.7 250 30.4
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.5e-29 133.3 213 32.9
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-29 132.9 264 29.9
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-29 132.9 264 29.9
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.9e-29 132.1 253 30.0
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-28 131.0 254 30.7
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.0e-28 130.2 244 29.5
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.1e-27 128.3 217 30.0
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-27 127.9 255 29.8
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.5e-27 127.9 255 29.8
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.3e-27 126.7 245 29.4
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.3e-27 126.3 240 31.7
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-27 125.9 240 31.7
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.3e-27 125.6 240 31.2
CSS0034224 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 9.6e-27 125.2 231 29.4
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-26 124.4 240 31.2
CSS0001173 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.1e-26 124.0 246 28.5
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-26 123.2 240 31.2
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-26 122.5 244 29.1
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-25 121.3 277 27.1
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-25 120.9 240 30.4
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-25 120.6 248 27.8
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.1e-25 120.2 246 28.5
Rhsim02G0117900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.0e-25 119.8 219 30.6
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.3e-25 119.4 200 33.5
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.2e-24 118.2 166 38.0
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-24 117.1 246 28.0
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.5e-24 116.3 246 28.0
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.6e-24 115.5 246 28.0
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.9e-24 115.2 144 41.7
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.4e-23 112.5 166 37.3
CSS0042152 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.1e-22 111.7 195 30.3
CSS0013522 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.4e-22 109.4 139 38.8
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 3.5e-21 106.7 277 24.9
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 4.6e-21 106.3 253 27.7
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.0e-20 105.1 144 38.2
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-20 105.1 213 31.0
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.9e-20 103.2 223 29.1
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.5e-19 101.3 211 28.9
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.5e-19 100.5 315 25.7
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.5e-19 100.5 315 25.7
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.5e-19 100.5 315 25.7
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.3e-19 100.1 241 27.0
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 3.3e-19 100.1 241 27.0
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.6e-19 99.4 190 31.1
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.4e-19 99.0 206 27.7
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 2.1e-18 97.4 239 25.5
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.2e-18 95.9 239 26.8
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 1.1e-17 95.1 238 25.2
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-17 94.0 161 34.2
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-17 94.0 161 34.2
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-17 94.0 161 34.2
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-17 94.0 161 34.2
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-17 94.0 161 34.2
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.4e-17 94.0 161 34.2
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 2.4e-17 94.0 235 26.8
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.1e-17 93.6 161 34.2
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-17 92.4 153 30.1
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 9.0e-17 92.0 255 28.2
Rhsim02G0108800 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.5e-16 91.3 188 31.4
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.6e-16 90.5 161 33.5
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 2.6e-16 90.5 279 24.4
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 3.4e-16 90.1 236 25.8
CSS0027839 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.5e-16 89.7 182 28.0
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 4.5e-16 89.7 238 25.2
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 7.6e-16 89.0 157 31.8
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 1.3e-15 88.2 249 25.7
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 2.9e-15 87.0 149 30.2
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 1.4e-14 84.7 239 24.3
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.2e-14 83.6 194 26.8
CSS0041926 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 7.1e-14 82.4 100 44.0
Rhsim12G0117400 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.1e-14 82.4 218 27.1
CSS0042257 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D018824 2.1e-13 80.9 99 43.4
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.7e-13 80.5 163 31.3
FAN18G1258 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.0e-13 79.3 253 24.1
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 6.0e-13 79.3 243 26.7
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.9e-13 79.0 187 26.7
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 7.9e-13 79.0 83 42.2
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 7.9e-13 79.0 83 42.2
FvH4_2g35252 Fragaria vesca HOM05D011367 ORTHO05D001590 1.0e-12 78.6 217 25.3
vmacro09690 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-12 78.6 143 32.9
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 1.1e-11 75.1 193 25.9
RhsimUnG0016200 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-11 74.7 72 44.4
Aqoxy3G02580 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 4.3e-11 73.2 269 23.4
CSS0009319 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.4e-11 72.4 181 25.4
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 4.8e-10 69.7 173 27.7
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.8e-09 67.8 148 29.7
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 4.1e-09 66.6 251 23.1
RhsimUnG0084500 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.0e-08 64.3 74 39.2
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.6e-08 63.9 124 29.8
Sabra05G0039100 Salix brachista HOM05D007376 ORTHO05D001969 4.5e-08 63.2 97 35.1
PSO104G0253 Papaver somniferum HOM05D009650 ORTHO05D011166 7.6e-08 62.4 96 33.3
Rhsim08G0172300 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.6e-08 62.4 106 32.1
RhsimUnG0169600 Rhododendron simsii HOM05D017361 ORTHO05D001590 1.0e-07 62.0 171 26.3
FvH4_1g25221 Fragaria vesca HOM05D011367 ORTHO05D001590 3.8e-07 60.1 192 24.0
Rhsim08G0004600 Rhododendron simsii HOM05D007376 ORTHO05D338607 8.4e-07 58.9 90 32.2
CSS0010137 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-06 58.2 45 48.9
PSO541G3274 Papaver somniferum HOM05D009650 ORTHO05D011166 2.5e-06 57.4 51 43.1
CSS0013627 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 4.2e-06 56.6 53 43.4
CSS0018286 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 5.5e-06 56.2 53 43.4
CSS0041278 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 5.5e-06 56.2 109 29.4


User provided reference genes

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