Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048354 Camellia sinensis var. sinensis HOM05D006446 ORTHO05D007832 8.1e-225 783.5 415 100.0
Dinv26843 Davidia involucrata HOM05D006446 ORTHO05D007832 1.9e-104 383.6 384 60.4
Hma1.2p1_0017F.1_g011530 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 1.7e-97 360.5 385 61.6
Actinidia36475 Actinidia chinensis HOM05D006446 ORTHO05D007832 3.8e-97 359.4 361 59.3
Atru.chr3.290 Acer truncatum HOM05D006446 ORTHO05D007832 6.0e-87 325.5 385 53.0
CiPaw.01G015300 Carya illinoinensis HOM05D006446 ORTHO05D007832 5.1e-86 322.4 385 50.6
GSVIVG01022084001 Vitis vinifera HOM05D006446 ORTHO05D007832 4.8e-84 315.8 385 51.2
Cpa.g.sc55.118 Carica papaya HOM05D006446 ORTHO05D007832 9.0e-83 311.6 405 50.1
Ciclev10026145m.g Citrus clementina HOM05D006446 ORTHO05D007832 7.6e-82 308.5 385 51.2
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 1.6e-79 300.8 366 50.0
Cfa004041 Carpinus fangiana HOM05D006446 ORTHO05D007832 6.7e-78 295.4 384 49.2
TAR376G0667 Trochodendron aralioides HOM05D006446 ORTHO05D007832 4.3e-77 292.7 385 49.6
Hma1.2p1_0017F.1_g011540 Hydrangea macrophylla HOM05D006446 ORTHO05D007832 5.7e-77 292.4 231 75.8
Rhsim08G0099200 Rhododendron simsii HOM05D006446 ORTHO05D007832 1.3e-76 291.2 444 44.8
Gorai.008G077700 Gossypium raimondii HOM05D006446 ORTHO05D007832 1.6e-76 290.8 388 48.2
Gohir.D12G070700 Gossypium hirsutum HOM05D006446 ORTHO05D007832 3.7e-76 289.7 388 47.9
QL06p040688 Quercus lobata HOM05D006446 ORTHO05D007832 3.1e-75 286.6 410 46.8
Gohir.A12G072800 Gossypium hirsutum HOM05D006446 ORTHO05D007832 6.9e-75 285.4 388 48.2
Oeu017452.1 Olea europaea HOM05D006446 ORTHO05D007832 5.9e-74 282.3 361 47.9
Migut.H00414 Erythranthe guttata HOM05D006446 ORTHO05D007832 1.3e-73 281.2 363 47.4
Sopen03g008450 Solanum pennellii HOM05D006446 ORTHO05D007832 2.2e-73 280.4 384 45.8
CANSAT01G1360 Cannabis sativa HOM05D006446 ORTHO05D007832 2.5e-72 276.9 386 46.9
CAN.G82.26 Capsicum annuum HOM05D006446 ORTHO05D007832 3.2e-72 276.6 385 46.0
Eucgr.A00813 Eucalyptus grandis HOM05D006446 ORTHO05D007832 5.1e-70 269.2 323 48.9
VMungo0251G0310 Vigna mungo HOM05D006446 ORTHO05D007832 7.4e-69 265.4 365 46.8
Eucgr.H01696 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.3e-68 264.6 362 48.1
Nitab4.5_0001169g0030 Nicotiana tabacum HOM05D006446 ORTHO05D007832 1.3e-68 264.6 346 47.1
vmacro17962 Vaccinium macrocarpon HOM05D006446 ORTHO05D007832 1.3e-68 264.6 231 64.5
Cc07_g06190 Coffea canephora HOM05D006446 ORTHO05D007832 2.2e-68 263.8 384 45.3
Eucgr.H01701 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.3e-68 262.3 385 47.8
Eucgr.H02072 Eucalyptus grandis HOM05D006446 ORTHO05D007832 6.3e-68 262.3 346 48.6
Solyc03g044370.3 Solanum lycopersicum HOM05D006446 ORTHO05D007832 6.3e-68 262.3 352 47.2
Lalb_Chr16g0388721 Lupinus albus HOM05D006446 ORTHO05D007832 1.4e-67 261.2 362 47.8
THA.LOC104827244 Tarenaya hassleriana HOM05D006446 ORTHO05D007832 3.1e-67 260.0 364 48.9
DCAR_010875 Daucus carota HOM05D006446 ORTHO05D007832 1.5e-66 257.7 348 47.4
Glyma.17G170400 Glycine max HOM05D006446 ORTHO05D007832 1.5e-66 257.7 364 47.0
Nitab4.5_0000333g0110 Nicotiana tabacum HOM05D006446 ORTHO05D007832 4.5e-66 256.1 365 44.4
TWI09G0730 Tripterygium wilfordii HOM05D006446 ORTHO05D007832 1.0e-65 255.0 389 44.7
Thecc.01G060300 Theobroma cacao HOM05D006446 ORTHO05D007832 1.3e-65 254.6 330 51.5
MSTRG.23733 Avicennia marina HOM05D006446 ORTHO05D007832 1.7e-65 254.2 348 46.8
Peaxi162Scf00685g00014 Petunia axillaris HOM05D006446 ORTHO05D007832 1.7e-65 254.2 395 43.0
Lj4g0016139 Lotus japonicus HOM05D006446 ORTHO05D007832 3.8e-65 253.1 361 45.7
Duzib147G1565 Durio zibethinus HOM05D006446 ORTHO05D007832 8.5e-65 251.9 389 45.8
Nn5g30357 Nelumbo nucifera HOM05D006446 ORTHO05D007832 3.2e-64 250.0 360 46.1
Medtr4g094860 Medicago truncatula HOM05D006446 ORTHO05D007832 2.7e-63 246.9 364 44.0
Psat4g085400 Pisum sativum HOM05D006446 ORTHO05D007832 2.7e-63 246.9 363 44.6
ClCG01G016920 Citrullus lanatus HOM05D006446 ORTHO05D007832 4.6e-63 246.1 384 42.7
ECA232G4400 Erigeron canadensis HOM05D006446 ORTHO05D007832 1.4e-62 244.6 364 45.6
Sabra05G0110700 Salix brachista HOM05D006446 ORTHO05D007832 3.0e-62 243.4 361 45.7
AL8G44180 Arabidopsis lyrata HOM05D006446 ORTHO05D007832 6.7e-62 242.3 366 44.8
Carub.0008s2734 Capsella rubella HOM05D006446 ORTHO05D007832 6.7e-62 242.3 366 45.4
Manes.13G120800 Manihot esculenta HOM05D006446 ORTHO05D007832 6.7e-62 242.3 207 62.3
Ca_22149_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 2.6e-61 240.4 361 44.6
Lj4A152T18 Lonicera japonica HOM05D006446 ORTHO05D007832 3.3e-61 240.0 345 46.4
TPR.G14592 Trifolium pratense HOM05D006446 ORTHO05D007832 3.3e-61 240.0 343 44.9
AT5G67170 Arabidopsis thaliana HOM05D006446 ORTHO05D007832 7.4e-61 238.8 363 44.4
Eucgr.H01692 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.3e-60 238.0 320 46.2
Phvul.003G242000 Phaseolus vulgaris HOM05D006446 ORTHO05D007832 3.7e-60 236.5 360 44.7
HanXRQChr15g0490771 Helianthus annuus HOM05D006446 ORTHO05D007832 4.8e-60 236.1 340 46.5
CARHR280460 Cardamine hirsuta HOM05D006446 ORTHO05D007832 1.1e-59 235.0 357 43.4
MELO3C007571.2 Cucumis melo HOM05D006446 ORTHO05D007832 1.4e-59 234.6 385 42.1
C09p11250 Brassica napus HOM05D006446 ORTHO05D007832 2.4e-59 233.8 365 44.7
BraA09t36599Z Brassica rapa HOM05D006446 ORTHO05D007832 2.4e-59 233.8 366 44.8
A09p09520 Brassica napus HOM05D006446 ORTHO05D007832 1.5e-58 231.1 365 44.7
BolC9t54014H Brassica oleracea HOM05D006446 ORTHO05D007832 1.5e-58 231.1 365 44.1
Aqoxy5G01186 Aquilegia oxysepala HOM05D006446 ORTHO05D007832 2.0e-58 230.7 364 45.3
Sp2g29500 Schrenkiella parvula HOM05D006446 ORTHO05D007832 3.4e-58 229.9 366 44.0
Hund16350 Selenicereus undatus HOM05D006446 ORTHO05D007832 8.5e-57 225.3 301 49.5
Lsat_1_v5_gn_4_165160 Lactuca sativa HOM05D006446 ORTHO05D007832 1.9e-56 224.2 353 42.2
Eucgr.H02065 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.5e-56 223.8 331 44.1
Eucgr.H02276 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.1e-55 220.7 302 46.4
Eucgr.H02068 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.7e-55 220.3 368 41.8
Eucgr.H02080 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.9e-55 218.8 232 54.7
Thhalv10004429m.g Eutrema salsugineum HOM05D006446 ORTHO05D007832 7.9e-55 218.8 361 43.5
BcaB04g20072 Brassica carinata HOM05D006446 ORTHO05D007832 2.3e-54 217.2 364 43.1
BcaC04g23194 Brassica carinata HOM05D006446 ORTHO05D007832 3.9e-54 216.5 365 41.9
PGSC0003DMG402034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 8.2e-52 208.8 278 47.5
Potri.005G140500 Populus trichocarpa HOM05D006446 ORTHO05D007832 1.1e-51 208.4 315 45.7
SGA_v2.0_scaffold143G35805 Striga asiatica HOM05D006446 ORTHO05D007832 1.8e-51 207.6 346 42.8
Aa31LG1G15700 Aethionema arabicum HOM05D006446 ORTHO05D007832 2.0e-50 204.1 370 41.9
Haze_15372 Corylus avellana HOM05D006446 ORTHO05D007832 5.0e-49 199.5 255 49.0
Ah.03g145380 Amaranthus hybridus HOM05D006446 ORTHO05D007832 1.5e-48 198.0 358 41.3
ATR0762G017 Amborella trichopoda HOM05D006446 ORTHO05D007832 7.2e-48 195.7 341 39.6
Eucgr.H01724 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.6e-47 194.5 190 55.3
CsaV3_6G043380 Cucumis sativus L. HOM05D006446 ORTHO05D007832 1.0e-46 191.8 230 46.5
CDE01G0083 Ceratophyllum demersum HOM05D006446 ORTHO05D007832 3.0e-46 190.3 349 40.7
Sed0014324 Sechium edule HOM05D006446 ORTHO05D007832 5.2e-46 189.5 230 46.5
AUR62003910 Chenopodium quinoa HOM05D006446 ORTHO05D007832 1.5e-45 188.0 299 44.5
EL10Ac6g15719 Beta vulgaris HOM05D006446 ORTHO05D007832 2.8e-44 183.7 324 42.0
HPP92_014795 Vanilla planifolia HOM05D006446 ORTHO05D007832 3.1e-43 180.3 366 36.1
Eucgr.H01706 Eucalyptus grandis HOM05D006446 ORTHO05D007832 7.0e-43 179.1 275 44.7
Eucgr.H02083 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.6e-42 177.9 233 47.6
arahy.Tifrunner.gnm1.ann1.UR5LFG Arachis hypogaea HOM05D006446 ORTHO05D007832 2.7e-42 177.2 234 44.9
Eucgr.H02059 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.7e-41 174.5 233 48.1
arahy.Tifrunner.gnm1.ann1.W9AXS3 Arachis hypogaea HOM05D006446 ORTHO05D007832 4.2e-40 169.9 234 44.0
Eucgr.H01733 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.7e-39 167.2 233 47.2
Eucgr.H01704 Eucalyptus grandis HOM05D006446 ORTHO05D007832 1.8e-38 164.5 232 50.0
PSO170G5547 Papaver somniferum HOM05D006446 ORTHO05D007832 4.0e-38 163.3 328 37.8
PSO210G7690 Papaver somniferum HOM05D006446 ORTHO05D007832 1.7e-36 157.9 312 38.1
Zm00001eb066800 Zea mays HOM05D006446 ORTHO05D007832 1.9e-32 144.4 340 34.4
AUR62001902 Chenopodium quinoa HOM05D006446 ORTHO05D007832 7.2e-32 142.5 194 47.4
unitig_27.g25331 Utricularia gibba HOM05D006446 ORTHO05D007832 9.5e-32 142.1 352 33.2
Eucgr.H02090 Eucalyptus grandis HOM05D006446 ORTHO05D007832 4.4e-29 133.3 231 40.7
Pp3c2_9710 Physcomitrium patens HOM05D006446 ORTHO05D007832 1.0e-25 122.1 329 30.4
AagrBONN_evm.TU.Sc2ySwM_368.596 Anthoceros agrestis HOM05D006446 ORTHO05D007832 2.3e-25 120.9 347 31.7
SEGI_14722 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 1.6e-23 114.8 188 42.6
Mapoly0012s0095 Marchantia polymorpha HOM05D006446 ORTHO05D007832 4.7e-23 113.2 351 29.9
Pp3c17_8570 Physcomitrium patens HOM05D006446 ORTHO05D007832 8.9e-22 109.0 317 30.9
Os04g0670400 Oryza sativa ssp. japonica HOM05D006446 ORTHO05D007832 1.7e-17 94.7 199 34.7
Actinidia12036 Actinidia chinensis HOM05D006446 ORTHO05D007832 1.2e-15 88.6 135 40.7
PGSC0003DMG401034099 Solanum tuberosum HOM05D006446 ORTHO05D007832 4.7e-15 86.7 88 45.5
CSS0024565 Camellia sinensis var. sinensis HOM05D002511 ORTHO05D013388 2.3e-14 84.3 47 78.7
Oeu014821.1 Olea europaea HOM05D006446 ORTHO05D007832 2.2e-12 77.8 72 59.7
Eucgr.H01699 Eucalyptus grandis HOM05D006446 ORTHO05D007832 2.9e-12 77.4 75 53.3
Ca_12108_v3 Cicer arietinum L. HOM05D000775 ORTHO05D007832 4.3e-08 63.5 66 48.5
SEGI_05115 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 9.5e-08 62.4 78 47.4
Actinidia12035 Actinidia chinensis HOM05D006446 ORTHO05D007832 3.6e-07 60.5 35 80.0
Eucgr.H01745 Eucalyptus grandis HOM05D006446 ORTHO05D007832 3.6e-07 60.5 127 44.9
Ca_21892_v3 Cicer arietinum L. HOM05D006446 ORTHO05D007832 6.2e-07 59.7 157 33.1


User provided reference genes

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