Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0011591 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 2.5e-32 141.4 64 100.0
CSS0019652 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 2.5e-32 141.4 64 100.0
CSS0025298 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 2.5e-32 141.4 64 100.0
CSS0034214 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 2.5e-32 141.4 64 100.0
CSS0048348 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 2.5e-32 141.4 64 100.0
CSS0007532 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.6e-31 137.5 64 96.9
CSS0025056 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 4.7e-31 137.1 64 98.4
CSS0014546 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D113506 1.0e-30 136.0 67 95.5
CSS0031474 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D113499 2.3e-25 118.2 67 85.1
CSS0012615 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 1.3e-09 65.9 32 87.5
CSS0028716 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 1.3e-09 65.9 32 87.5
CSS0020180 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 2.3e-09 65.1 32 90.6
CANSAT56G1713 Cannabis sativa HOM05D000555 ORTHO05D001906 8.6e-09 63.2 32 81.2
Rhsim13G0140500 Rhododendron simsii HOM05D000555 ORTHO05D001906 1.5e-08 62.4 32 81.2
vmacro03607 Vaccinium macrocarpon HOM05D000555 ORTHO05D001906 1.5e-08 62.4 32 84.4
QL05p067756 Quercus lobata HOM05D000555 ORTHO05D001906 2.5e-08 61.6 32 81.2
RcHm_v2.0_Chr5g0000481 Rosa chinensis HOM05D000555 ORTHO05D001906 2.5e-08 61.6 32 84.4
Cpa.g.sc27.226 Carica papaya HOM05D000555 ORTHO05D001906 4.3e-08 60.8 34 76.5
Dinv04395 Davidia involucrata HOM05D000555 ORTHO05D001906 4.3e-08 60.8 32 75.0
Oeu025966.1 Olea europaea HOM05D000555 ORTHO05D001906 4.3e-08 60.8 32 81.2
Sp2g12400 Schrenkiella parvula HOM05D000555 ORTHO05D001906 4.3e-08 60.8 32 78.1
Ah.09g233870 Amaranthus hybridus HOM05D000555 ORTHO05D001906 5.6e-08 60.5 32 75.0
Migut.M01445 Erythranthe guttata HOM05D000555 ORTHO05D001906 5.6e-08 60.5 32 81.2
MD05G1361800 Malus domestica HOM05D000555 ORTHO05D001906 7.3e-08 60.1 32 75.0
MD10G1339300 Malus domestica HOM05D000555 ORTHO05D001906 7.3e-08 60.1 32 75.0
Prupe.4G003600 Prunus persica HOM05D000555 ORTHO05D001906 7.3e-08 60.1 32 75.0
FAN21G3189 Fragaria x ananassa HOM05D000555 ORTHO05D001906 9.5e-08 59.7 32 81.2
Potri.006G004750 Populus trichocarpa HOM05D000555 ORTHO05D001906 9.5e-08 59.7 32 78.1
Potri.016G005400 Populus trichocarpa HOM05D000555 ORTHO05D001906 9.5e-08 59.7 32 78.1
Sabra06G0004000 Salix brachista HOM05D000555 ORTHO05D001906 9.5e-08 59.7 32 78.1
Thhalv10000739m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 1.2e-07 59.3 32 75.0
FvH4_3g00310 Fragaria vesca HOM05D000555 ORTHO05D001906 1.2e-07 59.3 32 78.1
Sc17g0008000 Simmondsia chinensis HOM05D000555 ORTHO05D001906 1.2e-07 59.3 32 78.1
TPR.G5976 Trifolium pratense HOM05D000555 ORTHO05D001906 1.2e-07 59.3 32 78.1
CiPaw.10G082000 Carya illinoinensis HOM05D000555 ORTHO05D001906 1.6e-07 58.9 32 75.0
Ciclev10014035m.g Citrus clementina HOM05D000555 ORTHO05D001906 2.1e-07 58.5 32 78.1
Haze_07020 Corylus avellana HOM05D000555 ORTHO05D001906 2.1e-07 58.5 32 78.1
Lalb_Chr07g0176931 Lupinus albus HOM05D000555 ORTHO05D001906 2.1e-07 58.5 32 75.0
Oeu057018.1 Olea europaea HOM05D000555 ORTHO05D001906 2.1e-07 58.5 32 78.1
Duzib192G0010 Durio zibethinus HOM05D000555 ORTHO05D001906 2.8e-07 58.2 32 75.0
Actinidia02283 Actinidia chinensis HOM05D000555 ORTHO05D001906 3.6e-07 57.8 29 86.2
CiPaw.09G108900 Carya illinoinensis HOM05D000555 ORTHO05D001906 3.6e-07 57.8 32 75.0
Lj2A256T100 Lonicera japonica HOM05D000555 ORTHO05D001906 3.6e-07 57.8 32 78.1
BcaC03g16985 Brassica carinata HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 81.2
A02p31510 Brassica napus HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 81.2
C02p48870 Brassica napus HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 81.2
BolC2t10981H Brassica oleracea HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 81.2
BraA02t08154Z Brassica rapa HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 81.2
AUR62012854 Chenopodium quinoa HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 75.0
AUR62021811 Chenopodium quinoa HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 75.0
Ca_20991_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 71.9
FAN25G3005 Fragaria x ananassa HOM05D000555 ORTHO05D001906 4.7e-07 57.4 29 86.2
Medtr4g134080 Medicago truncatula HOM05D000555 ORTHO05D001906 4.7e-07 57.4 33 69.7
Psat0s3798g0160 Pisum sativum HOM05D000555 ORTHO05D001906 4.7e-07 57.4 32 71.9
arahy.Tifrunner.gnm1.ann1.AVE6NE Arachis hypogaea HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
arahy.Tifrunner.gnm1.ann1.M87LIL Arachis hypogaea HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
Carub.0008s0009 Capsella rubella HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
ClCG01G011160 Citrullus lanatus HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
MELO3C025570.2 Cucumis melo HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
CsaV3_1G015470 Cucumis sativus L. HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
Manes.09G083700 Manihot esculenta HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 75.0
Phvul.003G087100 Phaseolus vulgaris HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
Hund21131 Selenicereus undatus HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 75.0
VMungo1215G2808 Vigna mungo HOM05D000555 ORTHO05D001906 8.1e-07 56.6 32 68.8
AL8G10260 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 1.1e-06 56.2 32 68.8
THA.LOC104806739 Tarenaya hassleriana HOM05D000555 ORTHO05D001906 1.1e-06 56.2 32 75.0
TAR624G0718 Trochodendron aralioides HOM05D000555 ORTHO05D001906 1.1e-06 56.2 32 71.9
Aa31sc219G80 Aethionema arabicum HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 71.9
EL10Ac8g20267 Beta vulgaris HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 71.9
CARHR173620 Cardamine hirsuta HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 68.8
Glyma.07G268200 Glycine max HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 68.8
Glyma.17G005500 Glycine max HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 68.8
Lj4g0005227 Lotus japonicus HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 68.8
Sabra16G0010300 Salix brachista HOM05D000555 ORTHO05D001906 1.4e-06 55.8 32 71.9
HanXRQChr16g0515741 Helianthus annuus HOM05D000555 ORTHO05D001906 1.8e-06 55.5 30 76.7
Migut.H01632 Erythranthe guttata HOM05D000555 ORTHO05D001906 2.3e-06 55.1 32 71.9
Lalb_Chr20g0119541 Lupinus albus HOM05D000555 ORTHO05D001906 2.3e-06 55.1 32 65.6
Thecc.06G241200 Theobroma cacao HOM05D000555 ORTHO05D001906 2.3e-06 55.1 32 71.9
TWI38G2314 Tripterygium wilfordii HOM05D000555 ORTHO05D001906 2.3e-06 55.1 32 71.9
Manes.08G068700 Manihot esculenta HOM05D000555 ORTHO05D001906 3.1e-06 54.7 32 68.8
Nitab4.5_0001296g0110 Nicotiana tabacum HOM05D000555 ORTHO05D001906 3.1e-06 54.7 32 75.0
arahy.Tifrunner.gnm1.ann1.JIL7XJ Arachis hypogaea HOM05D000555 ORTHO05D001906 4.0e-06 54.3 32 68.8
DCAR_002243 Daucus carota HOM05D000555 ORTHO05D001906 4.0e-06 54.3 34 70.6
GSVIVG01002824001 Vitis vinifera HOM05D000555 ORTHO05D001906 4.0e-06 54.3 32 75.0
Aqoxy1G02801 Aquilegia oxysepala HOM05D000555 ORTHO05D001906 5.2e-06 53.9 34 64.7
Gohir.A06G203800 Gossypium hirsutum HOM05D000555 ORTHO05D001906 5.2e-06 53.9 32 71.9
Gohir.D06G217750 Gossypium hirsutum HOM05D000555 ORTHO05D001906 5.2e-06 53.9 32 71.9
Gorai.010G248500 Gossypium raimondii HOM05D000555 ORTHO05D001906 5.2e-06 53.9 32 71.9
MBI15_g03489_MAGBIO Magnolia biondii HOM05D000555 ORTHO05D001906 5.2e-06 53.9 32 68.8
Sed0016925 Sechium edule HOM05D000555 ORTHO05D001906 5.2e-06 53.9 32 62.5
SGA_v2.0_scaffold49G18219 Striga asiatica HOM05D000555 ORTHO05D001906 5.2e-06 53.9 29 79.3
Eucgr.E03853 Eucalyptus grandis HOM05D000555 ORTHO05D001906 6.8e-06 53.5 32 68.8
HanXRQChr01g0003561 Helianthus annuus HOM05D000555 ORTHO05D001906 6.8e-06 53.5 32 75.0
PGR042G1037 Punica granatum HOM05D000555 ORTHO05D001906 6.8e-06 53.5 32 68.8
SalBow1G3972 Salvia bowleyana HOM05D000555 ORTHO05D001906 6.8e-06 53.5 29 75.9
Gohir.A09G067800 Gossypium hirsutum HOM05D000555 ORTHO05D001906 8.9e-06 53.1 32 71.9
Phvul.006G138400 Phaseolus vulgaris HOM05D000555 ORTHO05D001906 8.9e-06 53.1 32 68.8
VMungo0540G1416 Vigna mungo HOM05D000555 ORTHO05D001906 8.9e-06 53.1 32 71.9


User provided reference genes

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