Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048337 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1575.1 793 100.0
CSS0000087 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1511.1 792 97.2
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 0.0e+00 1250.3 794 80.0
CSS0029204 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1247.6 799 83.1
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 0.0e+00 1246.5 794 79.8
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 0.0e+00 1198.7 806 76.8
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 0.0e+00 1180.2 798 76.9
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 0.0e+00 1128.6 929 66.1
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 0.0e+00 1115.5 799 72.3
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 0.0e+00 1113.6 794 71.7
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 0.0e+00 1107.8 793 71.2
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 0.0e+00 1103.2 792 72.1
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 0.0e+00 1099.3 793 70.6
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 2.7e-309 1065.1 797 68.8
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 5.0e-308 1060.8 793 69.7
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 2.3e-305 1052.0 795 68.3
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 1.2e-304 1049.7 795 68.3
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 2.0e-301 1038.9 792 67.4
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 2.7e-301 1038.5 794 68.6
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 7.8e-301 1036.9 794 68.0
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 2.9e-300 1035.0 791 68.0
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 8.6e-300 1033.5 815 68.0
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 3.6e-298 1028.1 794 67.1
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 3.0e-297 1025.0 803 67.0
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 4.0e-297 1024.6 791 67.3
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 1.2e-296 1023.1 792 67.2
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 5.4e-294 1014.2 793 66.3
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 3.5e-293 1011.5 792 66.8
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 1.7e-292 1009.2 792 65.7
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 2.3e-292 1008.8 792 66.5
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 6.6e-292 1007.3 800 66.4
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 1.9e-291 1005.7 793 65.1
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 3.3e-291 1005.0 792 66.0
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 9.5e-291 1003.4 803 65.9
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 3.6e-290 1001.5 793 66.0
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 3.1e-289 998.4 792 65.8
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 1.5e-288 996.1 793 65.3
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 2.9e-287 991.9 792 64.8
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 6.4e-287 990.7 792 64.8
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 1.0e-284 983.4 793 64.9
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 8.6e-284 980.3 799 63.8
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 1.9e-283 979.2 793 64.2
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 3.3e-283 978.4 793 64.6
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 7.3e-283 977.2 845 62.4
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 1.4e-281 973.0 812 63.2
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 1.4e-281 973.0 703 70.8
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 8.9e-281 970.3 793 64.3
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 1.2e-280 969.9 792 63.5
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 5.8e-280 967.6 798 63.9
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 1.7e-279 966.1 711 69.3
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 2.4e-278 962.2 795 63.5
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 6.0e-277 957.6 707 68.9
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 7.8e-277 957.2 844 61.4
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 3.0e-276 955.3 794 64.1
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 2.5e-275 952.2 725 68.7
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 2.5e-275 952.2 726 67.8
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 3.3e-275 951.8 692 70.5
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 9.5e-275 950.3 800 62.8
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 6.2e-274 947.6 792 63.1
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 6.2e-274 947.6 799 63.1
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 3.1e-273 945.3 792 63.1
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 4.0e-273 944.9 813 62.5
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 4.9e-271 937.9 800 62.8
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 2.7e-269 932.2 710 67.3
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 1.3e-268 929.9 793 61.5
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 1.5e-267 926.4 754 65.3
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 3.1e-265 918.7 800 62.8
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 5.3e-265 917.9 692 68.1
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 2.0e-264 916.0 729 65.6
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 3.4e-264 915.2 727 65.5
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 2.9e-263 912.1 691 67.0
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 3.2e-262 908.7 796 62.1
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 1.2e-261 906.7 836 58.9
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 3.0e-260 902.1 717 64.9
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 8.7e-260 900.6 719 64.7
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 1.1e-257 893.6 679 66.4
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 4.0e-257 891.7 674 66.9
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 6.9e-257 891.0 793 60.5
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 2.0e-256 889.4 675 66.5
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 2.6e-256 889.0 688 66.3
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 4.5e-256 888.3 696 65.4
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 3.8e-255 885.2 688 66.3
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 1.1e-254 883.6 691 65.6
Cpa.g.sc7.235 Carica papaya HOM05D006132 ORTHO05D007305 2.1e-253 879.4 703 65.3
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 3.5e-253 878.6 609 73.7
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 9.6e-243 844.0 834 54.6
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 3.1e-241 839.0 644 68.3
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 1.6e-234 816.6 739 56.7
Peaxi162Scf00840g00429 Petunia axillaris HOM05D006132 ORTHO05D007305 4.3e-227 792.0 688 63.7
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 5.1e-220 768.5 702 58.4
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 6.4e-178 628.6 735 46.9
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 1.9e-177 627.1 798 45.1
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 2.7e-176 623.2 811 44.3
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 2.3e-164 583.6 720 44.2
CARHR240810 Cardamine hirsuta HOM05D006132 ORTHO05D007305 2.3e-164 583.6 460 65.4
CBR_g22939 Chara braunii HOM05D006132 ORTHO05D000048 1.5e-163 580.9 771 43.3
SHI18807 Sapria himalayana HOM05D006132 ORTHO05D007305 2.9e-162 576.6 922 40.1
Psat4g077080 Pisum sativum HOM05D006132 ORTHO05D007305 1.4e-153 547.7 525 58.9
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 9.3e-145 518.5 457 62.1
Psat4g077000 Pisum sativum HOM05D006132 ORTHO05D007305 2.6e-139 500.4 465 58.9
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 5.2e-71 273.5 227 65.6
Psat2g119040 Pisum sativum HOM05D006132 ORTHO05D007305 5.2e-71 273.5 224 63.8
Lsat_1_v5_gn_0_25341 Lactuca sativa HOM05D006132 ORTHO05D007305 1.3e-61 242.3 290 47.9
Solyc08g066000.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 5.6e-49 200.3 158 64.6
Peaxi162Scf00840g00428 Petunia axillaris HOM05D006132 ORTHO05D007305 1.1e-47 196.1 141 70.2
SHI18803 Sapria himalayana HOM05D006132 ORTHO05D007305 2.1e-27 128.6 89 71.9
MCO10G298 Micromonas commoda HOM05D006132 ORTHO05D007305 6.4e-21 107.1 502 24.5
Sabra06G0183100 Salix brachista HOM05D006132 ORTHO05D007305 3.2e-20 104.8 120 51.7
Zm00001eb053290 Zea mays HOM05D006132 ORTHO05D007305 4.2e-12 77.8 85 48.2
Glyma.11G174000 Glycine max HOM05D006132 ORTHO05D007305 8.7e-10 70.1 66 45.5


User provided reference genes

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