Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048272 Camellia sinensis var. sinensis HOM05D009210 ORTHO05D010367 1.8e-292 1008.4 479 100.0
Actinidia30107 Actinidia chinensis HOM05D009210 ORTHO05D010367 1.9e-121 440.3 554 47.8
Dinv19248 Davidia involucrata HOM05D009210 ORTHO05D010367 7.0e-79 298.9 406 48.8
Lj1A79G19 Lonicera japonica HOM05D009210 ORTHO05D010367 1.7e-48 198.0 488 33.2
Prupe.8G209900 Prunus persica HOM05D016859 ORTHO05D010367 3.3e-36 157.1 471 31.6
QL09p043653 Quercus lobata HOM05D009210 ORTHO05D010367 4.4e-33 146.7 505 30.1
QL07p009176 Quercus lobata HOM05D009210 ORTHO05D010367 7.6e-33 146.0 503 28.8
QL09p043508 Quercus lobata HOM05D009210 ORTHO05D010367 7.6e-33 146.0 503 28.8
QL09p043802 Quercus lobata HOM05D009210 ORTHO05D010367 1.7e-32 144.8 509 28.3
Actinidia37568 Actinidia chinensis HOM05D009210 ORTHO05D010367 1.2e-30 138.7 124 58.1
Oeu052100.2 Olea europaea HOM05D013334 ORTHO05D015998 1.8e-26 124.8 484 28.5
Thecc.01G245200 Theobroma cacao HOM05D009210 ORTHO05D010367 4.4e-25 120.2 466 30.5
Ciclev10019870m.g Citrus clementina HOM05D009210 ORTHO05D010367 1.7e-24 118.2 481 27.0
Duzib211G0683 Durio zibethinus HOM05D009210 ORTHO05D010367 4.9e-24 116.7 532 28.2
TWI59G1397 Tripterygium wilfordii HOM05D009210 ORTHO05D010367 1.1e-23 115.5 526 26.2
Cpa.g.sc8.212 Carica papaya HOM05D009210 ORTHO05D010367 1.4e-18 98.6 498 26.5
MD10G1171500 Malus domestica HOM05D016859 ORTHO05D010367 1.8e-18 98.2 340 33.2
Haze_24738 Corylus avellana HOM05D009210 ORTHO05D010367 3.1e-18 97.4 367 28.9
Manes.13G042500 Manihot esculenta HOM05D009210 ORTHO05D010367 2.6e-17 94.4 480 25.6
DCAR_000542 Daucus carota HOM05D009210 ORTHO05D010367 1.3e-16 92.0 584 24.1
Cfa002512 Carpinus fangiana HOM05D009210 ORTHO05D010367 1.8e-13 81.6 208 33.7
COL.COLO4_08165 Corchorus olitorius HOM05D009210 ORTHO05D010367 1.8e-13 81.6 507 26.0
RcHm_v2.0_Chr6g0285611 Rosa chinensis HOM05D016859 ORTHO05D010367 1.5e-12 78.6 226 33.2
FAN27G2643 Fragaria x ananassa HOM05D016859 ORTHO05D010367 3.6e-11 73.9 235 28.9
FAN15G1208 Fragaria x ananassa HOM05D016859 ORTHO05D010367 6.2e-11 73.2 234 30.3
MBI10_g16802_MAGBIO Magnolia biondii HOM05D024193 ORTHO05D010367 2.4e-10 71.2 285 25.6
MSTRG.17532 Avicennia marina HOM05D013334 ORTHO05D015998 5.3e-10 70.1 464 25.2
FvH4_2g19950 Fragaria vesca HOM05D016859 ORTHO05D010367 5.8e-09 66.6 250 28.4
SGA_v2.0_scaffold3G01596 Striga asiatica HOM05D009210 ORTHO05D015998 5.8e-09 66.6 282 27.3
Gohir.A07G202550 Gossypium hirsutum HOM05D009210 ORTHO05D010367 7.6e-09 66.2 316 28.8
MELO3C024146.2 Cucumis melo HOM05D026148 ORTHO05D010367 4.9e-08 63.5 375 25.1
Ca_09627_v3 Cicer arietinum L. HOM05D014010 ORTHO05D010367 6.4e-08 63.2 115 33.0
FAN24G1655 Fragaria x ananassa HOM05D016859 ORTHO05D010367 1.1e-07 62.4 250 27.6
Gorai.001G235700 Gossypium raimondii HOM05D009210 ORTHO05D010367 2.4e-07 61.2 305 27.9
ClCG09G009440 Citrullus lanatus HOM05D026148 ORTHO05D010367 3.5e-06 57.4 277 25.3
CANSAT01G1047 Cannabis sativa HOM05D009210 ORTHO05D010367 4.6e-06 57.0 102 31.4
Gohir.D07G208750 Gossypium hirsutum HOM05D009210 ORTHO05D010367 6.0e-06 56.6 151 32.5
Lj5g0020428 Lotus japonicus HOM05D014010 ORTHO05D010367 6.0e-06 56.6 115 29.6


User provided reference genes

Program Settings