Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.5e-206 720.7 352 100.0
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 7.7e-184 647.1 315 100.0
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.8e-162 575.5 310 89.4
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.9e-159 565.5 315 85.7
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 4.7e-157 558.1 314 84.1
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.4e-156 556.6 337 81.0
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 2.0e-155 552.7 315 83.2
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 4.4e-155 551.6 315 83.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 4.4e-155 551.6 340 79.7
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 6.3e-154 547.7 342 78.9
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.1e-153 545.4 316 83.5
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 4.1e-153 545.0 314 82.2
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 7.0e-153 544.3 339 78.8
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 9.1e-153 543.9 341 78.6
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 4.5e-152 541.6 328 80.2
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.9e-151 538.9 302 84.4
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 5.6e-150 534.6 302 84.8
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-149 533.5 342 77.5
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.0e-148 530.4 304 82.9
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 1.8e-148 529.6 278 91.4
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 3.0e-148 528.9 328 78.4
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 3.0e-148 528.9 311 82.6
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 4.0e-148 528.5 315 80.3
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 4.0e-148 528.5 317 80.1
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 8.9e-148 527.3 384 70.3
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.2e-147 526.9 338 76.9
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.5e-147 526.6 303 83.5
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.0e-147 526.2 303 82.2
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 2.6e-147 525.8 303 82.5
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 3.4e-147 525.4 323 78.9
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 3.4e-147 525.4 310 81.6
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 5.7e-147 524.6 303 82.8
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.5e-147 524.2 383 70.2
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 7.5e-147 524.2 337 76.6
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 7.5e-147 524.2 313 79.9
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 9.8e-147 523.9 337 76.0
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.3e-146 523.5 318 79.9
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.7e-146 523.1 304 82.2
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.9e-146 522.3 325 78.5
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 2.9e-146 522.3 304 80.3
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 3.7e-146 521.9 313 79.6
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 6.4e-146 521.2 304 80.9
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 6.4e-146 521.2 303 82.2
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.1e-145 520.4 302 80.5
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 2.4e-145 519.2 302 81.8
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.1e-145 518.5 325 77.8
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 4.1e-145 518.5 304 82.2
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.2e-144 516.9 325 77.2
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.7e-144 515.8 316 79.7
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.3e-143 513.5 304 79.3
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 8.6e-143 510.8 316 79.4
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.1e-142 510.4 293 82.6
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.5e-142 510.0 286 85.7
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.3e-142 508.8 316 79.1
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 7.3e-142 507.7 334 75.4
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.6e-141 505.4 327 76.8
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 6.2e-141 504.6 298 81.5
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-140 503.8 348 72.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.8e-140 503.1 304 79.3
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 6.8e-140 501.1 336 72.9
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 8.9e-140 500.7 299 80.9
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.4e-139 498.8 341 72.1
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 5.8e-139 498.0 299 80.6
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 7.5e-139 497.7 336 72.3
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 9.8e-139 497.3 323 74.3
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.9e-138 495.7 336 72.9
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 6.4e-138 494.6 328 73.5
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.6e-136 490.0 340 70.3
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.7e-136 489.2 326 73.3
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 4.6e-136 488.4 337 71.8
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 6.0e-136 488.0 324 74.7
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 8.6e-135 484.2 337 70.9
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.5e-134 483.4 333 72.4
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 3.6e-133 478.8 267 84.6
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 3.6e-133 478.8 315 76.8
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.7e-133 478.4 320 73.4
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 5.2e-132 474.9 372 66.4
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 2.0e-131 473.0 280 82.5
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.6e-131 472.6 295 78.0
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 2.6e-131 472.6 278 82.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.5e-131 471.1 351 67.8
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 2.9e-130 469.2 262 84.4
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.4e-129 466.8 324 71.6
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.4e-129 466.1 314 72.9
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 4.1e-129 465.3 317 71.6
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.5e-128 462.2 261 85.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.0e-127 460.7 304 74.0
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 3.0e-127 459.1 311 71.7
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 1.2e-125 453.8 358 65.4
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 1.2e-125 453.8 358 65.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.1e-125 453.0 366 63.4
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 4.0e-124 448.7 359 65.2
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 7.1e-121 438.0 304 70.1
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.7e-119 433.3 288 74.7
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.2e-117 427.2 303 69.6
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 3.1e-116 422.5 285 73.0
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.2e-115 420.6 354 63.0
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 2.6e-115 419.5 280 73.9
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 4.4e-115 418.7 239 83.7
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 3.8e-114 415.6 303 69.3
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.2e-113 412.5 314 66.6
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 5.6e-110 401.7 292 67.5
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.2e-107 394.0 286 69.2
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 3.8e-106 389.0 220 84.1
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 6.4e-106 388.3 322 58.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 5.4e-105 385.2 331 58.0
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.6e-104 382.1 211 87.2
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 5.8e-99 365.2 326 56.1
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.7e-98 363.6 325 55.7
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 9.3e-97 357.8 239 72.0
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.7e-96 356.3 261 70.1
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 7.4e-94 348.2 257 68.1
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 2.7e-88 329.7 300 53.0
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 8.7e-87 324.7 220 73.2
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.1e-80 303.5 225 68.9
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.0e-79 301.2 211 66.4
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.7e-69 266.2 351 41.6
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 4.0e-55 219.5 154 72.1
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.5e-54 215.3 143 73.4
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 7.2e-49 198.7 123 78.0
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 2.7e-48 196.8 129 72.9
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.6e-46 190.3 330 35.2
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.9e-41 174.1 282 38.7
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 4.2e-41 172.9 107 72.0
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.1e-36 156.4 97 79.4
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.6e-19 101.3 97 52.6
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 2.1e-16 90.9 63 68.3
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 1.5e-14 84.7 63 71.4


User provided reference genes

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