Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.1e-52 209.5 96 100.0
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 2.8e-43 178.3 97 87.6
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 2.8e-43 178.3 97 87.6
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 3.0e-42 174.9 97 85.6
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 4.0e-42 174.5 97 85.6
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 4.0e-42 174.5 97 84.5
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 5.2e-42 174.1 97 83.5
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 5.2e-42 174.1 97 84.5
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 5.2e-42 174.1 97 84.5
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 6.8e-42 173.7 97 84.5
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 6.8e-42 173.7 96 84.4
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 8.9e-42 173.3 97 84.5
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 8.9e-42 173.3 97 82.5
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 8.9e-42 173.3 97 84.5
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 8.9e-42 173.3 97 84.5
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 1.2e-41 172.9 97 83.5
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.2e-41 172.9 97 84.5
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.2e-41 172.9 97 84.5
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 1.5e-41 172.6 97 83.5
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 2.0e-41 172.2 97 83.5
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 83.5
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 83.5
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 82.5
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 82.5
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 82.5
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 83.5
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 82.5
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 83.5
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 2.6e-41 171.8 97 83.5
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 3.4e-41 171.4 97 82.5
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 3.4e-41 171.4 97 82.5
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 3.4e-41 171.4 96 83.3
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 4.4e-41 171.0 97 82.5
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 4.4e-41 171.0 97 82.5
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 4.4e-41 171.0 97 84.5
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 4.4e-41 171.0 97 82.5
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 5.7e-41 170.6 97 82.5
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 5.7e-41 170.6 97 82.5
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 5.7e-41 170.6 97 81.4
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 7.5e-41 170.2 96 81.2
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 7.5e-41 170.2 97 82.5
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 7.5e-41 170.2 105 78.1
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 7.5e-41 170.2 97 82.5
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 7.5e-41 170.2 96 81.2
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 7.5e-41 170.2 96 82.3
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 7.5e-41 170.2 96 82.3
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 82.5
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 81.4
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 82.5
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 81.4
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 82.5
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 81.4
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 81.4
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 9.8e-41 169.9 97 81.4
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 1.3e-40 169.5 96 81.2
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 1.3e-40 169.5 97 82.5
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 1.7e-40 169.1 97 80.4
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.7e-40 169.1 97 80.4
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 1.7e-40 169.1 97 82.5
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 1.7e-40 169.1 97 80.4
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 1.7e-40 169.1 97 80.4
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 1.7e-40 169.1 97 80.4
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 1.7e-40 169.1 96 81.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 2.2e-40 168.7 97 81.4
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 2.2e-40 168.7 97 81.4
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 2.2e-40 168.7 97 82.5
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 2.2e-40 168.7 96 81.2
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 2.2e-40 168.7 97 81.4
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 2.2e-40 168.7 97 79.4
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 2.8e-40 168.3 97 80.4
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 2.8e-40 168.3 97 80.4
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 2.8e-40 168.3 97 81.4
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 2.8e-40 168.3 96 79.2
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 4.9e-40 167.5 97 82.5
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 4.9e-40 167.5 96 80.2
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 6.3e-40 167.2 97 80.4
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 6.3e-40 167.2 97 79.4
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 6.3e-40 167.2 96 80.2
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 6.3e-40 167.2 96 81.2
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 8.3e-40 166.8 96 79.2
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.1e-39 166.4 97 81.4
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 1.1e-39 166.4 96 80.2
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 4.1e-39 164.5 97 78.4
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 5.4e-39 164.1 96 79.2
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 9.2e-39 163.3 76 94.7
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 3.5e-38 161.4 85 87.1
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 3.5e-38 161.4 96 80.2
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 2.3e-37 158.7 96 76.0
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 3.9e-37 157.9 95 76.8
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 3.9e-37 157.9 96 74.0
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 5.0e-37 157.5 85 84.7
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 5.0e-37 157.5 85 84.7
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 6.6e-37 157.1 121 66.1
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 3.3e-36 154.8 90 78.9
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 1.4e-34 149.4 96 71.9
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 1.7e-32 142.5 85 78.8
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 2.9e-32 141.7 72 87.5
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 4.9e-32 141.0 71 88.7
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 4.9e-32 141.0 71 88.7
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 2.7e-30 135.2 96 62.5
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 3.5e-30 134.8 66 86.4
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 4.6e-30 134.4 97 72.2
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 4.6e-30 134.4 84 75.0
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 4.3e-28 127.9 74 81.1
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.1e-26 123.2 99 57.6
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 1.6e-22 109.4 97 60.8
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 1.6e-22 109.4 79 68.4
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 5.6e-20 100.9 75 68.0
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.2e-19 99.8 61 80.3
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.9e-15 85.9 56 73.2


User provided reference genes

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